Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen12g024500 hypothetical protein Spenn-ch12 + View
Sopen10g021810 hypothetical protein Spenn-ch10 + View
Sopen01g027430 hypothetical protein Spenn-ch01 - View
Sopen04g020870 hypothetical protein Spenn-ch04 - View
Sopen09g016880 hypothetical protein Spenn-ch09 - View
Sopen11g023860 hypothetical protein Spenn-ch11 + View
Sopen06g014290 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Reverse transcriptase, RNA-dependent DNA polymerase, Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch06 - View
Sopen10g006450 hypothetical protein Spenn-ch10 + View
Sopen00g005870 hypothetical protein Spenn-ch00 - View
Sopen01g009690 hypothetical protein | GAG/POL/ENV polyprotein. Spenn-ch01 - View
Sopen06g005270 hypothetical protein Spenn-ch06 + View
Sopen01g010600 hypothetical protein Spenn-ch01 + View
Sopen09g024400 hypothetical protein | GAG/POL/ENV polyprotein. Spenn-ch09 - View
Sopen05g012930 hypothetical protein Spenn-ch05 + View
Sopen10g025720 hypothetical protein Spenn-ch10 - View
Sopen07g009690 hypothetical protein Spenn-ch07 - View
Sopen01g014820 hypothetical protein Spenn-ch01 - View
Sopen03g009790 hypothetical protein Spenn-ch03 - View
Sopen00g005220 hypothetical protein Spenn-ch00 - View
Sopen09g013420 hypothetical protein Spenn-ch09 + View
Sopen09g021250 hypothetical protein Spenn-ch09 + View
Sopen03g020340 RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Berteros evening primrose), hypothetical protein | GAG/POL/ENV polyprotein. Spenn-ch03 - View
Sopen10g024170 hypothetical protein Spenn-ch10 - View
Sopen09g012850 hypothetical protein Spenn-ch09 - View
Sopen04g009460 hypothetical protein Spenn-ch04 - View
Sopen05g017220 hypothetical protein Spenn-ch05 + View
Sopen08g016860 hypothetical protein | DNA/RNA polymerases superfamily protein. Spenn-ch08 - View
Sopen06g004680 hypothetical protein Spenn-ch06 + View
Sopen00g006350 unknown protein Spenn-ch00 - View
Sopen10g008270 hypothetical protein Spenn-ch10 - View
Sopen10g021490 hypothetical protein Spenn-ch10 + View
Sopen10g020400 hypothetical protein Spenn-ch10 + View
Sopen07g017480 hypothetical protein Spenn-ch07 + View
Sopen04g017190 hypothetical protein Spenn-ch04 + View
Sopen11g021560 hypothetical protein | DNA/RNA polymerases superfamily protein. Spenn-ch11 - View
Sopen07g013680 hypothetical protein Spenn-ch07 - View
Sopen01g009290 hypothetical protein Spenn-ch01 - View
Sopen01g018090 hypothetical protein Spenn-ch01 + View
Sopen02g009380 hypothetical protein Spenn-ch02 + View
Sopen01g013240 hypothetical protein Spenn-ch01 - View
Sopen12g008440 hypothetical protein Spenn-ch12 + View
Sopen03g016680 hypothetical protein Spenn-ch03 - View
Sopen01g015540 hypothetical protein | GAG/POL/ENV polyprotein. Spenn-ch01 - View
Sopen02g008620 hypothetical protein Spenn-ch02 - View
Sopen06g010870 Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2. | VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1) | FUNCTIONS IN: protein binding | INVOLVED IN: intracellular transport | LOCATED IN: in 7 components | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: PapD-like , Major sperm protein , Vesicle-associated membrane protein | BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 Spenn-ch06 + View
Sopen06g009380 hypothetical protein Spenn-ch06 - View
Sopen01g024110 hypothetical protein Spenn-ch01 + View
Sopen04g012830 hypothetical protein Spenn-ch04 + View
Sopen12g009420 hypothetical protein Spenn-ch12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Erigeron canadensis ECA232G4319 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA236G0205 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA238G4057 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA232G3149 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA240G2087 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA236G2398 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA234G0264 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA246G1433 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA247G3449 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G0677 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA247G3783 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA236G3930 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA233G1213 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA238G1884 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA240G1865 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA247G0609 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G2569 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA238G2059 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G4645 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA232G3224 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA234G2121 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA234G0125 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA236G2513 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA232G2659 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA236G0448 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA240G0228 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA234G2437 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA238G4169 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA236G1603 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA238G0313 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA246G1702 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA240G1418 Conyza_canadensis_scaffold:5 - View
Olea europaea Oeu027543.1 chr18 + View
Papaver somniferum PSO832G3058 NC_039367.1 + View
Papaver somniferum PSO170G3262 NC_039360.1 - View
Papaver somniferum PSO170G4798 NC_039360.1 - View
Rhododendron simsii Rhsim01G0069400 chr01 - View
Sapria himalayana SHI12491 scaffold11_13529635 + View
Sapria himalayana SHI22549 scaffold31_7046607 + View
Solanum tuberosum PGSC0003DMG400040243 Integrase core domain containing protein ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400039178 Integrase core domain containing protein ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400038460 Gene of unknown function ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400040452 Integrase core domain containing protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400042025 Integrase core domain containing protein ST4.03ch11 - View