Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen09g021250 hypothetical protein Spenn-ch09 + View
Sopen11g009630 RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Berteros evening primrose), hypothetical protein | DNA/RNA polymerases superfamily protein. Spenn-ch11 + View
Sopen00g005220 hypothetical protein Spenn-ch00 - View
Sopen07g009690 hypothetical protein Spenn-ch07 - View
Sopen10g025720 hypothetical protein Spenn-ch10 - View
Sopen05g012930 hypothetical protein Spenn-ch05 + View
Sopen09g024400 hypothetical protein | GAG/POL/ENV polyprotein. Spenn-ch09 - View
Sopen01g017190 hypothetical protein Spenn-ch01 - View
Sopen09g023200 hypothetical protein Spenn-ch09 + View
Sopen09g012850 hypothetical protein Spenn-ch09 - View
Sopen03g009210 hypothetical protein Spenn-ch03 - View
Sopen10g024170 hypothetical protein Spenn-ch10 - View
Sopen05g011120 hypothetical protein Spenn-ch05 - View
Sopen10g020850 hypothetical protein Spenn-ch10 + View
Sopen06g014290 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Reverse transcriptase, RNA-dependent DNA polymerase, Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch06 - View
Sopen09g016880 hypothetical protein Spenn-ch09 - View
Sopen05g027810 hypothetical protein Spenn-ch05 - View
Sopen10g021810 hypothetical protein Spenn-ch10 + View
Sopen01g010600 hypothetical protein Spenn-ch01 + View
Sopen09g010920 hypothetical protein Spenn-ch09 - View
Sopen06g005270 hypothetical protein Spenn-ch06 + View
Sopen00g005870 hypothetical protein Spenn-ch00 - View
Sopen07g019820 hypothetical protein Spenn-ch07 + View
Sopen02g008620 hypothetical protein Spenn-ch02 - View
Sopen12g008440 hypothetical protein Spenn-ch12 + View
Sopen01g013240 hypothetical protein Spenn-ch01 - View
Sopen03g016680 hypothetical protein Spenn-ch03 - View
Sopen07g019170 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch07 - View
Sopen01g018090 hypothetical protein Spenn-ch01 + View
Sopen09g008080 hypothetical protein Spenn-ch09 - View
Sopen01g024110 hypothetical protein Spenn-ch01 + View
Sopen05g014210 hypothetical protein Spenn-ch05 - View
Sopen06g009380 hypothetical protein Spenn-ch06 - View
Sopen08g018120 hypothetical protein Spenn-ch08 - View
Sopen10g025400 hypothetical protein Spenn-ch10 - View
Sopen06g010870 Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2. | VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1) | FUNCTIONS IN: protein binding | INVOLVED IN: intracellular transport | LOCATED IN: in 7 components | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: PapD-like , Major sperm protein , Vesicle-associated membrane protein | BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 Spenn-ch06 + View
Sopen10g021490 hypothetical protein Spenn-ch10 + View
Sopen00g006350 unknown protein Spenn-ch00 - View
Sopen06g004680 hypothetical protein Spenn-ch06 + View
Sopen09g022250 hypothetical protein Spenn-ch09 + View
Sopen08g016860 hypothetical protein | DNA/RNA polymerases superfamily protein. Spenn-ch08 - View
Sopen07g012060 hypothetical protein Spenn-ch07 - View
Sopen01g008890 hypothetical protein Spenn-ch01 - View
Sopen06g011410 hypothetical protein Spenn-ch06 - View
Sopen07g017480 hypothetical protein Spenn-ch07 + View
Sopen09g025820 hypothetical protein Spenn-ch09 - View
Sopen09g020520 hypothetical protein | GAG/POL/ENV polyprotein. Spenn-ch09 - View
Sopen00g004260 hypothetical protein Spenn-ch00 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Cannabis sativa CANSAT01G0388 NC_044373.1 + View
Erigeron canadensis ECA246G2361 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA238G0353 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA233G0633 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA240G1418 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA236G0909 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA236G3103 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA232G2659 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA232G2025 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA247G0674 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA246G4341 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G2896 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA234G1566 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA247G0354 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA236G0447 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA246G2806 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA240G3981 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA247G2074 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G2716 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA233G3797 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA232G4319 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA236G4148 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA246G2477 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA247G1933 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA232G3362 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA234G0358 Conyza_canadensis_scaffold:4 + View
Papaver somniferum PSO478G2382 NC_039361.1 - View
Sequoiadendron giganteum SEGI_08957 chr1 + View
Sapria himalayana SHI03559 scaffold5_19632047 + View
Sapria himalayana SHI22599 scaffold31_7046607 + View
Sapria himalayana SHI26148 scaffold42_4718812 + View
Sapria himalayana SHI01950 scaffold3_21451142 + View
Sapria himalayana SHI11727 scaffold12_13443846 - View
Solanum tuberosum PGSC0003DMG400042025 Integrase core domain containing protein ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400046977 Integrase core domain containing protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400035569 Integrase core domain containing protein ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG400012078 Pol ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400037391 Integrase core domain containing protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400034824 Gene of unknown function ST4.03ch01 + View
Tripterygium wilfordii TWI31G0852 NC_052233.1 + View