Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen10g007730 hypothetical protein Spenn-ch10 + View
Sopen01g024500 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen03g016020 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch03 + View
Sopen07g006490 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch07 + View
Sopen06g010980 hypothetical protein Spenn-ch06 - View
Sopen08g017240 hypothetical protein Spenn-ch08 - View
Sopen11g011920 hypothetical protein Spenn-ch11 + View
Sopen00g012040 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch00 - View
Sopen01g023890 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch01 + View
Sopen04g018170 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch04 - View
Sopen04g017010 hypothetical protein Spenn-ch04 - View
Sopen05g020300 hypothetical protein Spenn-ch05 - View
Sopen07g013250 hypothetical protein Spenn-ch07 - View
Sopen07g017460 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 + View
Sopen00g003390 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch00 + View
Sopen06g007150 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 - View
Sopen07g012090 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 + View
Sopen10g017440 hypothetical protein Spenn-ch10 + View
Sopen11g018640 hypothetical protein Spenn-ch11 - View
Sopen01g016010 hypothetical protein Spenn-ch01 + View
Sopen07g016580 hypothetical protein Spenn-ch07 + View
Sopen09g012310 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen10g008120 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch10 - View
Sopen06g010230 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 - View
Sopen07g020290 hypothetical protein Spenn-ch07 + View
Sopen02g003120 hypothetical protein Spenn-ch02 + View
Sopen06g013190 hypothetical protein Spenn-ch06 + View
Sopen01g026920 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch01 + View
Sopen05g016440 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen02g008520 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch02 + View
Sopen03g011820 hypothetical protein Spenn-ch03 - View
Sopen02g003940 hypothetical protein Spenn-ch02 + View
Sopen10g010950 hypothetical protein Spenn-ch10 + View
Sopen01g015620 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen07g014830 hypothetical protein Spenn-ch07 + View
Sopen10g025370 hypothetical protein Spenn-ch10 - View
Sopen07g022300 hypothetical protein Spenn-ch07 + View
Sopen10g009530 hypothetical protein Spenn-ch10 - View
Sopen11g020740 hypothetical protein Spenn-ch11 - View
Sopen07g014510 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 - View
Sopen12g011700 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch12 + View
Sopen10g010450 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch10 - View
Sopen04g010340 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgaris EL10Ac7g17463 PF14111 - Domain of unknown function (DUF4283) (DUF4283) Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT64G1660 NC_044379.1 + View
Cannabis sativa CANSAT25G0727 NC_044370.1 + View
Cannabis sativa CANSAT35G1027 NC_044378.1 - View
Carya illinoinensis CiPaw.10G104100 PF13456 - Reverse transcriptase-like (RVT_3) Chr10 - View
Erigeron canadensis ECA234G2392 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA236G0899 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA240G1343 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA233G4110 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA246G3449 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA238G3409 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G2238 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA234G3911 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA248G2549 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA238G2472 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA238G0342 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA247G1369 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA240G3188 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA247G0930 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA238G4228 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA246G5243 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA240G0545 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA238G1242 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA238G1697 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G0835 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA240G3555 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA248G0579 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA246G0074 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA232G4122 Conyza_canadensis_scaffold:2 + View
Fragaria vesca FvH4_7g03341 PTHR19446//PTHR19446:SF384 - REVERSE TRANSCRIPTASES // SUBFAMILY NOT NAMED Fvb7 - View
Fragaria vesca FvH4_5g32541 Fvb5 - View
Olea europaea Oeu021739.1 chr12 - View
Papaver somniferum PSO170G1940 NC_039360.1 + View
Papaver somniferum PSO832G2731 NC_039367.1 - View
Papaver somniferum PSO478G4853 NC_039361.1 + View
Papaver somniferum PSO170G4446 NC_039360.1 - View
Papaver somniferum PSO675G9216 NC_039358.1 - View
Papaver somniferum PSO478G0819 NC_039361.1 + View
Papaver somniferum PSO675G1347 NC_039358.1 - View
Quercus lobata QL10p054270 10 + View
Rhododendron simsii Rhsim02G0177700 chr02 + View
Sequoiadendron giganteum SEGI_33462 chr10 + View
Sequoiadendron giganteum SEGI_18886 chr11 + View
Tripterygium wilfordii TWI59G0875 NC_052248.1 + View