Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen01g048400 RNA-binding KH domain-containing protein | FUNCTIONS IN: RNA binding, nucleic acid binding | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup , K Homology , K Homology, type 1 | BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein Spenn-ch01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.1221 chr3 + View
Acer truncatum Atru.chr6.1282 chr6 + View
Actinidia chinensis Actinidia02397 Lachesis_group2 + View
Arabidopsis lyrata AL4G12140 scaffold_4 + View
Avicennia marina MSTRG.23384 ScioBoG_3895_HRSCAF_3912 - View
Aquilegia oxysepala Aqoxy6G00831 CHR06 - View
Aquilegia oxysepala Aqoxy5G01363 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TNN216 PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FM3F8T PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZZ6MF9 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6UD7AX PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I0E29T PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT2G22600 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087)%2C K Homology%2C type 1%2C subgroup (InterPro:IPR018111)%2C K Homology%2C type 1 (InterPro:IPR004088)%3B BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G51580.1)%3B Has 2093 Blast hits to 1434 proteins in 142 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1296%3B Fungi - 118%3B Plants - 634%3B Viruses - 0%3B Other Eukaryotes - 45 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0767G040 AmTr_v1.0_scaffold00033 - View
Brassica carinata BcaC07g41047 ChrC07 - View
Brassica carinata BcaB08g35100 ChrB08 + View
Brassica napus A04p17070 A04 + View
Brassica napus C08p40480 C08 - View
Brassica oleracea BolC8t51619H C8 - View
Brassica rapa BraA09t41132Z A09 - View
Brassica rapa BraA04t17336Z A04 + View
Beta vulgaris EL10Ac9g22061 PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr9_EL10_PGA_scaffold8 - View
Beta vulgaris EL10Ac6g15184 PTHR10288:SF173 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G1771.6 PGAv.1.6.scaffold1771 + View
Cannabis sativa CANSAT01G2876 NC_044373.1 + View
Corylus avellana Haze_10503 Similar to HEN4: KH domain-containing protein HEN4 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_03896 Similar to RCF3: RNA-binding KH domain-containing protein RCF3 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc07_g13890 Putative KH domain-containing protein At4g18375 chr7 - View
Coffea canephora Cc02_g20850 Putative KH domain-containing protein At4g18375 chr2 - View
Citrus clementina Ciclev10025599m.g scaffold_7 - View
Ceratophyllum demersum CDE04G2913 2 + View
Carpinus fangiana Cfa006867 Cfa02 - View
Cardamine hirsuta CARHR113820 RNA-binding KH domain-containing protein Chr4 + View
Carya illinoinensis CiPaw.07G046000 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr07 - View
Carya illinoinensis CiPaw.05G029000 PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr05 - View
Carya illinoinensis CiPaw.06G158300 PTHR10288:SF173 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr06 + View
Corchorus olitorius COL.COLO4_27374 hypothetical protein AWUE01019532.1 + View
Carica papaya Cpa.g.sc55.10 supercontig_55 - View
Chenopodium quinoa AUR62012875 At4g18375: KH domain-containing protein At4g18375 C_Quinoa_Scaffold_1040 - View
Chenopodium quinoa AUR62003677 PEP: RNA-binding KH domain-containing protein PEPPER C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62017987 IGF2BP2: Insulin-like growth factor 2 mRNA-binding protein 2 C_Quinoa_Scaffold_3086 + View
Capsella rubella Carub.0004s0175 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN scaffold_4 + View
Daucus carota DCAR_021907 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv13568 GWHABJS00000014 - View
Durio zibethinus Duzib264G0380 NW_019167960.1 + View
Durio zibethinus Duzib132G0240 NW_019167915.1 - View
Durio zibethinus Duzib147G0101 NW_019168470.1 + View
Erythranthe guttata Migut.H02281 scaffold_8 - View
Erythranthe guttata Migut.B00545 scaffold_2 - View
Eutrema salsugineum Thhalv10000090m.g PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN scaffold_15 + View
Gossypium hirsutum Gohir.A12G085222 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN A12 + View
Gossypium hirsutum Gohir.D12G083500 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN D12 - View
Glycine max Glyma.09G200300 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Gm09 + View
Glycine max Glyma.08G067400 PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Gm08 - View
Glycine max Glyma.01G021400 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Gm01 - View
Gossypium raimondii Gorai.008G093500 Chr08 + View
Hydrangea macrophylla Hma1.2p1_1093F.1_g256300 Hma1.2p1_1093F.1 + View
Lupinus albus Lalb_Chr09g0325931 PTHR10288//PTHR10288:SF160 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Lalb_Chr09 - View
Lotus japonicus Lj2g0002599 PTHR10288//PTHR10288:SF160 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN chr2 - View
Lotus japonicus Lj4g0011898 PTHR10288//PTHR10288:SF173 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN chr4 - View
Lonicera japonica Lju188A5T29 GWHAAZE00000040 + View
Magnolia biondii MBI16_g30321_MAGBIO AED:0.27 Chr16 + View
Manihot esculenta Manes.10G097500 Chromosome10 - View
Manihot esculenta Manes.13G101500 Chromosome13 + View
Medicago truncatula Medtr5g031500 hypothetical protein chr5 - View
Nelumbo nucifera Nn5g29837 chr5 - View
Nelumbo nucifera Nn1g05615 chr1 + View
Nicotiana tabacum Nitab4.5_0000402g0020 K Homology domain, type 1, K Homology domain Nitab4.5_0000402 + View
Olea europaea Oeu032333.1 chr20 - View
Petunia axillaris Peaxi162Scf00299g00546 RNA-binding KH domain-containing protein Peaxi162Scf00299 - View
Petunia axillaris Peaxi162Scf00085g01319 RNA-binding KH domain-containing protein Peaxi162Scf00085 - View
Prunus persica Prupe.8G070900 PTHR10288:SF173 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Pp08 + View
Pisum sativum Psat7g101720 KH domain chr7LG7 + View
Pisum sativum Psat1g213960 KH domain chr1LG6 - View
Papaver somniferum PSO675G1336 NC_039358.1 - View
Papaver somniferum PSO541G0350 NC_039363.1 + View
Populus trichocarpa Potri.007G011900 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr07 + View
Phaseolus vulgaris Phvul.002G145300 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr02 - View
Phaseolus vulgaris Phvul.002G213600 PTHR10288:SF173 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Chr02 + View
Quercus lobata QL11p025374 11 + View
Quercus lobata QL06p036070 6 + View
Rhododendron simsii Rhsim11G0142000 chr11 - View
Striga asiatica SGA_v2.0_scaffold83G26380 scaffold83 + View
Striga asiatica SGA_v2.0_scaffold195G40868 scaffold195 + View
Salvia bowleyana SalBow3G2520 GWHASIU00000006 - View
Salix brachista Sabra07G0009300 GWHAAZH00000007 + View
Salix brachista Sabra17G0028900 GWHAAZH00000017 - View
Solanum lycopersicum Solyc11g010840.2 KH domain-containing protein (AHRD V3.3 *** A0A2I0WKQ9_9ASPA) SL4.0ch11 + View
Schrenkiella parvula Sp4g01640 PTHR10288:SF160 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN ch4-1 + View
Solanum tuberosum PGSC0003DMG400016189 Nucleic acid binding protein ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400033575 Poly(RC)-binding protein ST4.03ch01 + View
Selenicereus undatus Hund14081 Scaffold_33679 - View
Trochodendron aralioides TAR628G0653 group5 + View
Trochodendron aralioides TAR381G0632 group11 - View
Trochodendron aralioides TAR376G1230 group14 + View
Theobroma cacao Thecc.01G088600 Nucleic acid binding protein Chromosome_1 - View
Theobroma cacao Thecc.02G128300 RNA-binding KH domain-containing protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104804179 KH domain-containing protein HEN4 NW_010971389.1 + View
Trifolium pratense TPR.G2838 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI74G1061 NC_052234.1 - View
Vaccinium macrocarpon vmacro01865 Similar to HEN4: KH domain-containing protein HEN4 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View