Gene: Sopen01g048400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g048400
  • Transcript Identifier Sopen01g048400.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 104652553-104658742 : positive

Gene Family Information

  • ID HOM05D000442
  • #Genes/#Species 1174/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g048400.1

Descriptions

  • Description RNA-binding KH domain-containing protein | FUNCTIONS IN: RNA binding, nucleic acid binding | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup , K Homology , K Homology, type 1 | BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010093
ISO
PLAZA Integrative Orthologyspecification of floral organ identity AT5G64390
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT5G64390
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT5G64390
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT5G64390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G64390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G64390
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G64390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036612 K Homology domain, type 1 superfamily
IPR004088 K Homology domain, type 1
IPR004087 K Homology domain
Mapman id Description
35.1 not assigned.annotated