Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen06g008070 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch06 + View
Sopen05g026260 hypothetical protein Spenn-ch05 - View
Sopen05g020910 hypothetical protein Spenn-ch05 - View
Sopen07g014830 hypothetical protein Spenn-ch07 + View
Sopen09g011430 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen10g009530 hypothetical protein Spenn-ch10 - View
Sopen07g014510 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 - View
Sopen10g010450 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch10 - View
Sopen01g019410 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen11g020740 hypothetical protein Spenn-ch11 - View
Sopen03g026550 hypothetical protein Spenn-ch03 - View
Sopen11g024150 hypothetical protein Spenn-ch11 - View
Sopen04g013750 hypothetical protein Spenn-ch04 + View
Sopen05g016440 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen04g011470 hypothetical protein Spenn-ch04 + View
Sopen05g018940 hypothetical protein Spenn-ch05 - View
Sopen09g015010 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen01g015620 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen02g003940 hypothetical protein Spenn-ch02 + View
Sopen12g018040 Reverse transcriptase, RNA-directed DNA polymerase (reverse transcriptase)-related family protein | CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein Spenn-ch12 - View
Sopen09g021380 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen08g014400 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch08 + View
Sopen07g013630 hypothetical protein Spenn-ch07 + View
Sopen01g007160 hypothetical protein Spenn-ch01 + View
Sopen05g017140 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 + View
Sopen10g017440 hypothetical protein Spenn-ch10 + View
Sopen05g024150 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen06g007150 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 - View
Sopen01g016010 hypothetical protein Spenn-ch01 + View
Sopen07g016580 hypothetical protein Spenn-ch07 + View
Sopen06g005190 hypothetical protein Spenn-ch06 + View
Sopen09g012310 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen09g017040 hypothetical protein Spenn-ch09 - View
Sopen09g010280 hypothetical protein Spenn-ch09 - View
Sopen11g018190 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch11 + View
Sopen03g016020 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch03 + View
Sopen01g010010 hypothetical protein Spenn-ch01 + View
Sopen06g010980 hypothetical protein Spenn-ch06 - View
Sopen11g015660 hypothetical protein Spenn-ch11 + View
Sopen05g013290 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 + View
Sopen04g017010 hypothetical protein Spenn-ch04 - View
Sopen05g020300 hypothetical protein Spenn-ch05 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G4940 LG-9 + View
Brassica carinata BcaC01g03249 ChrC01 - View
Brassica oleracea BolC3t17704H C3 + View
Camellia sinensis var. sinensis CSS0028707 hypothetical protein VITISV_034261 [Vitis vinifera] Chr11 - View
Cannabis sativa CANSAT01G1250 NC_044373.1 - View
Cannabis sativa CANSAT78G1955 NC_044376.1 + View
Citrullus lanatus ClCG10G007440 Cysteine-rich receptor-like protein kinase CG_Chr10 - View
Citrullus lanatus ClCG03G011090 Reverse transcriptase, putative; 100033-105622 CG_Chr03 - View
Chenopodium quinoa AUR62001113 Protein of unknown function C_Quinoa_Scaffold_2716 + View
Erigeron canadensis ECA238G0410 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA240G3555 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA233G2706 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA238G2472 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA236G2789 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA236G2980 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA246G1206 Conyza_canadensis_scaffold:8 - View
Lonicera japonica Lj1C95T4 GWHAAZE00000001 + View
Medicago truncatula Medtr7g056813 hypothetical protein chr7 + View
Papaver somniferum PSO421G0192 NW_020619603.1 - View
Papaver somniferum PSO675G9216 NC_039358.1 - View
Papaver somniferum PSO063G0103 NC_039364.1 - View
Papaver somniferum PSO063G2021 NC_039364.1 + View
Quercus lobata QL09p051624 9 - View
Quercus lobata QL09p052593 9 - View
Sechium edule Sed0007969 LG09 - View
Sapria himalayana SHI03541 scaffold5_19632047 - View
Solanum tuberosum PGSC0003DMG400045526 Retrotransposon protein, unclassified ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400005480 Reverse transcriptase ST4.03ch03 + View