Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen12g016340 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | FUNCTIONS IN: exonuclease activity, nucleic acid binding | LOCATED IN: intracellular | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Exonuclease , Polynucleotidyl transferase, ribonuclease H fold , Exonuclease, RNase T/DNA polymerase III | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein . Spenn-ch12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15460 LG-6 + View
Acer truncatum Atru.chr4.225 chr4 - View
Actinidia chinensis Actinidia32977 Lachesis_group25 + View
Arabidopsis lyrata AL7G12030 scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V14QW9 PTHR30231//PTHR30231:SF6 - DNA POLYMERASE III SUBUNIT EPSILON // EXONUCLEASE FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT4G39810 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein%3B FUNCTIONS IN: exonuclease activity%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C Exonuclease%2C RNase T/DNA polymerase III (InterPro:IPR013520)%3B BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein (TAIR:AT1G74390.1)%3B Has 1538 Blast hits to 1532 proteins in 632 species: Archae - 0%3B Bacteria - 1272%3B Metazoa - 0%3B Fungi - 0%3B Plants - 102%3B Viruses - 0%3B Other Eukaryotes - 164 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung00903 Contig372 - View
Brassica napus C01p00840 C01 - View
Brassica napus A01p00730 A01 - View
Brassica oleracea BolC1t00085H C1 - View
Brassica rapa BraA01t00077Z A01 - View
Beta vulgaris EL10Ac6g15071 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT01G0426 NC_044373.1 - View
Cicer arietinum L. Ca_17716_v3 Ca_LG6_v3 + View
Corylus avellana Haze_24977 Similar to NEN4: Protein NEN4 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc07_g15550 Polynucleotidyl transferase, ribonuclease H-like superfamily protein chr7 - View
Citrus clementina Ciclev10026247m.g scaffold_7 + View
Carpinus fangiana Cfa002703 Cfa01 - View
Cardamine hirsuta CARHR246890 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Chr7 + View
Carya illinoinensis CiPaw.04G096700 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Chr04 + View
Carya illinoinensis CiPaw.03G138900 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED Chr03 + View
Citrullus lanatus ClCG01G018960 Polynucleotidyl transferase, ribonuclease H-like superfamily protein LENGTH=255 CG_Chr01 - View
Cucumis melo MELO3C007775.2 protein NEN4 isoform X1 chr08 - View
Carica papaya Cpa.g.sc20.225 supercontig_20 - View
Chenopodium quinoa AUR62002032 NEN4: Protein NEN4 C_Quinoa_Scaffold_4480 - View
Chenopodium quinoa AUR62003764 NEN4: Protein NEN4 C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0007s0172 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON scaffold_7 - View
Cucumis sativus L. CsaV3_6G045640 protein NEN4 isoform X1 chr6 - View
Daucus carota DCAR_014244 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv16311 GWHABJS00000014 - View
Durio zibethinus Duzib264G0229 NW_019167960.1 + View
Durio zibethinus Duzib147G0178 NW_019168470.1 + View
Eucalyptus grandis Eucgr.I00411 Chr09 + View
Erythranthe guttata Migut.H02386 scaffold_8 - View
Eutrema salsugineum Thhalv10026855m.g PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON scaffold_1 - View
Eutrema salsugineum Thhalv10000648m.g PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON scaffold_15 - View
Fragaria x ananassa FAN26G1618 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED Fvb1-2 - View
Fragaria x ananassa FAN19G0108 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED Fvb1-4 - View
Fragaria x ananassa FAN23G0055 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Fvb1-3 - View
Fragaria vesca FvH4_1g21490 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED Fvb1 - View
Gossypium hirsutum Gohir.A02G132500 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON A02 - View
Gossypium hirsutum Gohir.D03G043900 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON D03 - View
Glycine max Glyma.08G138700 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Gm08 - View
Glycine max Glyma.05G180900 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Gm05 - View
Gossypium raimondii Gorai.003G044900 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0011F.1_g007150 Hma1.2p1_0011F.1 - View
Lupinus albus Lalb_Chr12g0203691 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED Lalb_Chr12 + View
Lupinus albus Lalb_Chr07g0185031 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Lalb_Chr07 + View
Lotus japonicus Lj4g0003283 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED chr4 + View
Lonicera japonica Lj4A881T26 GWHAAZE00000004 + View
Malus domestica MD01G1024500 Polynucleotidyl transferase Chr01 + View
Manihot esculenta Manes.12G138200 Chromosome12 - View
Medicago truncatula Medtr8g091290 ribonuclease H superfamily polynucleotidyl transferase chr8 - View
Nelumbo nucifera Nn1g05270 chr1 + View
Nelumbo nucifera Nn5g29014 chr5 + View
Nicotiana tabacum Nitab4.5_0000214g0070 Exonuclease, RNase T/DNA polymerase III, Exonuclease, Ribonuclease H-like domain Nitab4.5_0000214 - View
Petunia axillaris Peaxi162Scf00183g01416 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Peaxi162Scf00183 - View
Punica granatum PGR004G1214 NC_045131.1 - View
Prunus persica Prupe.6G179800 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Pp06 + View
Pisum sativum Psat7g052960 Exonuclease chr7LG7 - View
Papaver somniferum PSO541G1589 NC_039363.1 - View
Papaver somniferum PSO133G0030 NW_020618823.1 + View
Papaver somniferum PSO210G6317 NC_039359.1 + View
Populus trichocarpa Potri.005G079100 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Chr05 - View
Populus trichocarpa Potri.007G088500 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Chr07 + View
Phaseolus vulgaris Phvul.002G262000 PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Chr02 - View
Quercus lobata QL06p050310 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0115371 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0008900 chr08 + View
Striga asiatica SGA_v2.0_scaffold47G17752 scaffold47 + View
Salvia bowleyana SalBow3G1128 GWHASIU00000006 - View
Salix brachista Sabra07G0073000 GWHAAZH00000007 + View
Salix brachista Sabra05G0065100 GWHAAZH00000005 - View
Simmondsia chinensis Sc16g0005460 GWHAASQ00000016 + View
Sechium edule Sed0005278 LG10 - View
Sechium edule Sed0002028 LG14 - View
Sapria himalayana SHI11586 scaffold12_13443846 - View
Solanum lycopersicum Solyc04g054720.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1LS20_ARTAN) SL4.0ch04 + View
Schrenkiella parvula Sp7g36080 PTHR30231:SF6 - EXONUCLEASE FAMILY PROTEIN-RELATED ch7-6 + View
Solanum tuberosum PGSC0003DMG400027918 Exonuclease/ nucleic acid binding ST4.03ch04 - View
Trochodendron aralioides TAR628G0798 group5 + View
Theobroma cacao Thecc.01G106000 DNA polymerase III polC-type Chromosome_1 - View
Trifolium pratense TPR.G2189 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI53G1339 NC_052244.1 + View
Vaccinium macrocarpon vmacro18615 Similar to NEN4: Protein NEN4 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0186 CM024069.1 - View
Vitis vinifera GSVIVG01022160001 chr7 - View