Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen03g006020 Polynucleotide adenylyltransferase family protein | FUNCTIONS IN: RNA binding, nucleotidyltransferase activity | INVOLVED IN: RNA processing | LOCATED IN: chloroplast | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain | BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein Spenn-ch03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G14880 LG-8 + View
Acer truncatum Atru.chr3.962 chr3 - View
Actinidia chinensis Actinidia17382 Lachesis_group11 - View
Arabidopsis lyrata AL3G50550 scaffold_3 + View
Avicennia marina MSTRG.3623 ScioBoG_102836_HRSCAF_103072 - View
Aquilegia oxysepala Aqoxy6G01693 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I9I9NC PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.28WWIL PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT2G17580 Polynucleotide adenylyltransferase family protein Polynucleotide adenylyltransferase family protein%3B FUNCTIONS IN: RNA binding%2C nucleotidyltransferase activity%3B INVOLVED IN: RNA processing%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Poly A polymerase%2C head domain (InterPro:IPR002646)%3B BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT1G28090.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica napus A06p33820 A06 - View
Brassica rapa BraA06t26313Z A06 - View
Camellia sinensis var. sinensis CSS0011149 PREDICTED: uncharacterized protein LOC104879172 [Vitis vinifera] Chr1 + View
Capsicum annuum CAN.G890.79 PGAv.1.6.scaffold890 - View
Capsicum annuum CAN.G354.19 PGAv.1.6.scaffold354 + View
Cannabis sativa CANSAT25G2539 NC_044370.1 + View
Cicer arietinum L. Ca_24967_v3 Ca_LG8_v3 - View
Corylus avellana Haze_03672 Protein of unknown function 2 + View
Coffea canephora Cc07_g11690 Polynucleotide adenylyltransferase family protein chr7 - View
Citrus clementina Ciclev10025049m.g scaffold_7 + View
Cardamine hirsuta CARHR107770 Poly(A) polymerase, putative Chr3 + View
Carya illinoinensis CiPaw.07G003800 PTHR13734:SF48 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Chr07 + View
Citrullus lanatus ClCG10G000320 CCA-adding enzyme CG_Chr10 + View
Cucumis melo MELO3C013730.2 poly(A) polymerase I chr06 + View
Corchorus olitorius COL.COLO4_22540 hypothetical protein AWUE01017979.1 - View
Capsella rubella Carub.0003s3167 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN scaffold_3 + View
Cucumis sativus L. CsaV3_3G000350 poly(A) polymerase I chr3 + View
Davidia involucrata Dinv40177 GWHABJS00000014 + View
Durio zibethinus Duzib147G0915 NW_019168470.1 - View
Erigeron canadensis ECA238G0768 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.I02230 Chr09 + View
Eutrema salsugineum Thhalv10022674m.g PTHR13734:SF48 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN scaffold_11 - View
Fragaria x ananassa FAN23G0471 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Fvb1-3 + View
Fragaria x ananassa FAN19G2653 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Fvb1-4 + View
Fragaria x ananassa FAN26G2442 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Fvb1-2 - View
Fragaria x ananassa FAN28G0178 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Fvb1-1 - View
Fragaria vesca FvH4_1g10510 2.7.7.19//2.7.7.72 - Polynucleotide adenylyltransferase / RNA adenylating enzyme // CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Fvb1 + View
Gossypium hirsutum Gohir.A07G170800 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN A07 - View
Gossypium hirsutum Gohir.D07G177600 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN D07 - View
Glycine max Glyma.11G084602 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Gm11 - View
Glycine max Glyma.01G159600 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Gm01 + View
Gossypium raimondii Gorai.001G198500 Chr01 - View
Hydrangea macrophylla Hma1.2p1_0300F.1_g118140 Hma1.2p1_0300F.1 + View
Lupinus albus Lalb_Chr09g0321271 PTHR13734:SF48 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Lalb_Chr09 + View
Lotus japonicus Lj2g0005059 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN chr2 - View
Lonicera japonica Lj2C496T9 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_2_74361 Lsat_1_v8_lg_2 - View
Malus domestica MD15G1233000 Polynucleotide adenylyltransferase family protein Chr15 + View
Malus domestica MD02G1119000 Polynucleotide adenylyltransferase family protein Chr02 + View
Manihot esculenta Manes.01G154100 Chromosome01 - View
Medicago truncatula Medtr5g023810 tRNA nucleotidyltransferase/poly(A) polymerase chr5 - View
Nelumbo nucifera Nn5g30961 chr5 - View
Nicotiana tabacum Nitab4.5_0000495g0150 Poly A polymerase, head domain Nitab4.5_0000495 + View
Nicotiana tabacum Nitab4.5_0000702g0090 Poly A polymerase, head domain Nitab4.5_0000702 - View
Olea europaea Oeu042490.2 scaffold402 + View
Oryza sativa ssp. japonica Os03g0131400 Polynucleotide adenylyltransferase region domain containing protein. chr03 - View
Punica granatum PGR119G2422 NC_045132.1 + View
Prunus persica Prupe.7G180900 Pp07 - View
Pisum sativum Psat2g149440 Poly A polymerase head domain chr2LG1 - View
Papaver somniferum PSO675G6547 NC_039358.1 - View
Populus trichocarpa Potri.005G100100 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Chr05 - View
Phaseolus vulgaris Phvul.002G115200 PTHR13734:SF48 - POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN Chr02 - View
Quercus lobata QL06p052810 6 - View
Quercus lobata QL06p053768 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0097411 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0197700 chr10 + View
Salix brachista Sabra05G0082700 GWHAAZH00000005 - View
Simmondsia chinensis Sc07g0001330 GWHAASQ00000007 - View
Sechium edule Sed0011549 LG04 - View
Sapria himalayana SHI29487 scaffold69_2594531 - View
Solanum lycopersicum Solyc02g082810.3 Poly(A) polymerase I (AHRD V3.3 *** A0A1J3HIS1_NOCCA) SL4.0ch02 + View
Solanum lycopersicum Solyc03g032170.2 Unknown protein SL4.0ch03 + View
Schrenkiella parvula Sp3g30930 PTHR13734//PTHR13734:SF48 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER // POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN ch3-6 + View
Solanum tuberosum PGSC0003DMG400001522 Poly(A) polymerase ST4.03ch02 + View
Trochodendron aralioides TAR625G1209 group4 + View
Theobroma cacao Thecc.01G006800 Polynucleotide adenylyltransferase family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807432 uncharacterized protein LOC104807432 NW_010963495.1 + View
Tripterygium wilfordii TWI09G0539 NC_052245.1 + View
Vaccinium macrocarpon vmacro20527 Similar to pcnB: Poly(A) polymerase I (Salmonella typhi OX%3D90370) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0737 CM024074.1 - View
Vitis vinifera GSVIVG01003841001 chr4 - View
Zea mays Zm00001eb002540 Zm00001e000258 Polynucleotide adenylyltransferase family protein 1 + View