Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen03g026550 hypothetical protein Spenn-ch03 - View
Sopen07g014510 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 - View
Sopen04g010340 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch04 + View
Sopen10g020500 hypothetical protein Spenn-ch10 - View
Sopen11g013960 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch11 + View
Sopen08g015180 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch08 + View
Sopen07g014830 hypothetical protein Spenn-ch07 + View
Sopen05g020910 hypothetical protein Spenn-ch05 - View
Sopen02g001330 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Reverse transcriptase, RNA-dependent DNA polymerase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch02 - View
Sopen05g026260 hypothetical protein Spenn-ch05 - View
Sopen03g011190 hypothetical protein Spenn-ch03 + View
Sopen11g009770 hypothetical protein Spenn-ch11 + View
Sopen01g015620 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen04g011470 hypothetical protein Spenn-ch04 + View
Sopen05g016440 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen02g008520 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch02 + View
Sopen05g018940 hypothetical protein Spenn-ch05 - View
Sopen11g024150 hypothetical protein Spenn-ch11 - View
Sopen04g013750 hypothetical protein Spenn-ch04 + View
Sopen05g024780 hypothetical protein Spenn-ch05 + View
Sopen07g020290 hypothetical protein Spenn-ch07 + View
Sopen02g003120 hypothetical protein Spenn-ch02 + View
Sopen06g013900 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 + View
Sopen12g016250 hypothetical protein Spenn-ch12 + View
Sopen10g006460 hypothetical protein Spenn-ch10 - View
Sopen09g017040 hypothetical protein Spenn-ch09 - View
Sopen09g010280 hypothetical protein Spenn-ch09 - View
Sopen11g018640 hypothetical protein Spenn-ch11 - View
Sopen01g016010 hypothetical protein Spenn-ch01 + View
Sopen00g012500 hypothetical protein Spenn-ch00 - View
Sopen06g005190 hypothetical protein Spenn-ch06 + View
Sopen09g012310 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen05g024150 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen07g005730 hypothetical protein Spenn-ch07 - View
Sopen07g012090 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 + View
Sopen05g017140 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 + View
Sopen07g021060 hypothetical protein Spenn-ch07 - View
Sopen00g003390 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch00 + View
Sopen10g013580 hypothetical protein Spenn-ch10 - View
Sopen09g022950 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 - View
Sopen08g007800 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch08 + View
Sopen09g021380 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen08g014400 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch08 + View
Sopen07g013250 hypothetical protein Spenn-ch07 - View
Sopen04g017010 hypothetical protein Spenn-ch04 - View
Sopen01g021250 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen05g013290 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 + View
Sopen04g011860 hypothetical protein Spenn-ch04 - View
Sopen12g026800 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch12 + View
Sopen07g006490 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch07 + View
Sopen12g013620 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch12 + View
Sopen00g014260 hypothetical protein Spenn-ch00 + View
Sopen10g026030 hypothetical protein Spenn-ch10 - View
Sopen10g007730 hypothetical protein Spenn-ch10 + View
Sopen01g024500 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Cannabis sativa CANSAT80G0090 NC_044372.1 + View
Erigeron canadensis ECA236G3066 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA236G2124 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA246G3232 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G4122 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA232G4145 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA248G2294 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA247G2529 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA247G1346 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA238G2495 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA234G0563 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA238G3214 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA238G0624 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA240G3390 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA233G6043 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA240G3188 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA236G2789 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA247G2442 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA246G3449 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA247G3342 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G1047 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA247G0216 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA234G0583 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA246G1206 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA248G2460 Conyza_canadensis_scaffold:9 + View
Fragaria vesca FvH4_4g10141 PF13456 - Reverse transcriptase-like (RVT_3) Fvb4 - View
Helianthus annuus HanXRQChr13g0387241 Putative RNA-directed DNA polymerase, eukaryota; Reverse transcriptase zinc-binding domain HanXRQChr13 - View
Olea europaea Oeu000328.1 chr17 + View
Papaver somniferum PSO675G0110 NC_039358.1 - View
Papaver somniferum PSO782G0379 NC_039365.1 + View
Papaver somniferum PSO063G1400 NC_039364.1 + View
Papaver somniferum PSO017G5897 NC_039362.1 + View
Quercus lobata QL09p047247 9 - View
Quercus lobata QL04p084391 4 - View
Rhododendron simsii Rhsim01G0154700 chr01 - View
Sechium edule Sed0019957 LG01 + View
Sapria himalayana SHI10253 scaffold10_15062905 - View
Sapria himalayana SHI23298 scaffold36_5715340 - View
Solanum tuberosum PGSC0003DMG400013069 Conserved gene of unknown function ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400008725 Gene of unknown function ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400015911 RNase H family protein ST4.03ch11 - View
Tripterygium wilfordii TWI23G0529 NC_052239.1 - View