Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc11g007920.1 Histone H2B (AHRD V3.3 *-* A0A200PZ88_9MAGN) SL4.0ch11 - View
Solyc06g074750.1 Histone H2B (AHRD V3.3 *-* A0A200R5C1_9MAGN) SL4.0ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31sc23G50 sc-23 - View
Aethionema arabicum Aa31LG1G12840 LG-1 + View
Acer truncatum Atru.chr8.1724 chr8 - View
Acer truncatum Atru.chr3.3829 chr3 + View
Arabidopsis lyrata AL6G34020 scaffold_6 - View
Arabidopsis lyrata AL5G24690 scaffold_5 - View
Avicennia marina MSTRG.18706 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.17757 ScioBoG_19834_HRSCAF_19925 - View
Amaranthus hybridus Ah.08g211410 AmaHy_arrow1_Scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XCYW33 KOG1744 - Histone H2B arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LK8GY6 K11252 - histone H2B (H2B) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PWN22Y K11252 - histone H2B (H2B) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G22880 histone B2 Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta%2C and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. histone B2 (HTB2)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%2C nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G45980 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta%2C and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. HTB9%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1)%3B Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0%3B Bacteria - 64%3B Metazoa - 2275%3B Fungi - 213%3B Plants - 487%3B Viruses - 0%3B Other Eukaryotes - 577 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT2G37470 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G53650.1)%3B Has 3293 Blast hits to 3281 proteins in 346 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2242%3B Fungi - 218%3B Plants - 466%3B Viruses - 0%3B Other Eukaryotes - 367 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB08g36399 ChrB08 + View
Brassica carinata BcaC04g19607 ChrC04 - View
Brassica napus A10p18150 A10 + View
Brassica napus C03p12540 C03 - View
Brassica napus C09p53760 C09 + View
Brassica oleracea BolC9t58251H C9 + View
Brassica oleracea BolC3t13726H C3 - View
Brassica rapa BraA10t43890Z A10 + View
Beta vulgaris EL10Ac7g15970 K11252 - histone H2B (H2B) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0039771 hypothetical protein PRUPE_ppa012932mg [Prunus persica] Chr11 + View
Camellia sinensis var. sinensis CSS0027212 histone H2B.2 [Camellia sinensis] Chr1 - View
Capsicum annuum CAN.G1432.5 PGAv.1.6.scaffold1432 - View
Capsicum annuum CAN.G394.26 PGAv.1.6.scaffold394 + View
Cicer arietinum L. Ca_01699_v3 Ca_LG1_v3 + View
Corylus avellana Haze_24046 Similar to Probable histone H2B.1 (Medicago truncatula OX%3D3880) 6 + View
Corylus avellana Haze_23522 Similar to At1g08170: Histone H2B.2 (Arabidopsis thaliana OX%3D3702) 6 + View
Cardamine hirsuta CARHR154340 Histone H2B Chr5 - View
Cardamine hirsuta CARHR190650 Histone H2B Chr6 + View
Carya illinoinensis CiPaw.13G098000 KOG1744 - Histone H2B Chr13 - View
Carica papaya Cpa.g.sc190.16 supercontig_190 - View
Chenopodium quinoa AUR62001825 Probable histone H2B.1 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62009612 HIS2B: Histone H2B C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0005s1183 K11252 - histone H2B (H2B) scaffold_5 - View
Capsella rubella Carub.0006s2066 K11252 - histone H2B (H2B) scaffold_6 - View
Cucumis sativus L. CsaV3_1G014090 Histone H2B chr1 - View
Daucus carota DCAR_015504 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_006129 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_018759 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv06154 GWHABJS00000007 + View
Davidia involucrata Dinv36359 GWHABJS00000009 + View
Davidia involucrata Dinv35638 GWHABJS00000015 - View
Durio zibethinus Duzib170G0746 NW_019167871.1 - View
Durio zibethinus Duzib093G2084 NW_019167937.1 + View
Durio zibethinus Duzib168G2205 NW_019168159.1 - View
Durio zibethinus Duzib170G0929 NW_019167871.1 - View
Durio zibethinus Duzib150G0640 NW_019167882.1 + View
Eucalyptus grandis Eucgr.J00390 Chr10 - View
Eucalyptus grandis Eucgr.B03925 Chr02 - View
Erythranthe guttata Migut.D02296 scaffold_4 + View
Eutrema salsugineum Thhalv10017408m.g K11252 - histone H2B (H2B) scaffold_10 + View
Eutrema salsugineum Thhalv10002705m.g K11252 - histone H2B (H2B) scaffold_4 + View
Eutrema salsugineum Thhalv10014927m.g K11252 - histone H2B (H2B) scaffold_2 - View
Eutrema salsugineum Thhalv10014958m.g K11252 - histone H2B (H2B) scaffold_2 - View
Fragaria x ananassa FAN02G4254 K11252 - histone H2B (H2B) Fvb6-4 - View
Fragaria x ananassa FAN14G1419 K11252 - histone H2B (H2B) Fvb6-1 + View
Fragaria x ananassa FAN16G2803 K11252 - histone H2B (H2B) Fvb3-3 + View
Fragaria x ananassa FAN21G2361 K11252 - histone H2B (H2B) Fvb3-2 + View
Gossypium hirsutum Gohir.D03G128700 K11252 - histone H2B (H2B) D03 - View
Gossypium hirsutum Gohir.A05G086500 K11252 - histone H2B (H2B) A05 - View
Gossypium hirsutum Gohir.D05G087800 K11252 - histone H2B (H2B) D05 - View
Gossypium hirsutum Gohir.A03G039100 K11252 - histone H2B (H2B) A03 + View
Glycine max Glyma.13G321600 K11252 - histone H2B (H2B) Gm13 - View
Glycine max Glyma.12G179100 K11252 - histone H2B (H2B) Gm12 + View
Glycine max Glyma.12G065100 K11252 - histone H2B (H2B) Gm12 - View
Glycine max Glyma.10G198500 K11252 - histone H2B (H2B) Gm10 + View
Glycine max Glyma.11G141600 K11252 - histone H2B (H2B) Gm11 - View
Gossypium raimondii Gorai.003G135400 Chr03 - View
Gossypium raimondii Gorai.009G089900 Chr09 - View
Lupinus albus Lalb_Chr19g0136891 K11252 - histone H2B (H2B) Lalb_Chr19 - View
Lupinus albus Lalb_Chr24g0394981 K11252 - histone H2B (H2B) Lalb_Chr24 - View
Lotus japonicus Lj3g0020202 K11252 - histone H2B (H2B) chr3 - View
Lotus japonicus Lj3g0019527 K11252 - histone H2B (H2B) chr3 - View
Lonicera japonica Lj1P157T37 GWHAAZE00000001 - View
Lonicera japonica Lj1P213T21 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_1_64840 K11252 - histone H2B (H2B) Lsat_1_v8_lg_1 - View
Malus domestica MD03G1128400 Histone superfamily protein Chr03 + View
Malus domestica MD04G1120800 Histone superfamily protein Chr04 + View
Malus domestica MD03G1097700 Histone superfamily protein Chr03 - View
Malus domestica MD11G1149100 Histone superfamily protein Chr11 + View
Manihot esculenta Manes.10G052900 Chromosome10 + View
Manihot esculenta Manes.04G012600 Chromosome04 - View
Manihot esculenta Manes.11G152700 Chromosome11 + View
Manihot esculenta Manes.11G133700 Chromosome11 - View
Medicago truncatula Medtr1g090780 core histone H2A/H2B/H3/H4 chr1 + View
Nicotiana tabacum Nitab4.5_0000096g0190 Histone-fold, Histone core, Histone H2B Nitab4.5_0000096 - View
Nicotiana tabacum Nitab4.5_0000173g0180 Histone H2B, Histone core, Histone-fold Nitab4.5_0000173 - View
Olea europaea Oeu007729.1 chr4 - View
Petunia axillaris Peaxi162Scf00983g00007 Histone H2B.10 Peaxi162Scf00983 - View
Punica granatum PGR102G2144 NC_045129.1 + View
Punica granatum PGR102G2544 NC_045129.1 + View
Prunus persica Prupe.6G250100 K11252 - histone H2B (H2B) Pp06 + View
Prunus persica Prupe.6G113500 K11252 - histone H2B (H2B) Pp06 + View
Papaver somniferum PSO063G3501 NC_039364.1 + View
Papaver somniferum PSO801G0502 NW_020628818.1 - View
Papaver somniferum PSO339G3576 NC_039366.1 + View
Populus trichocarpa Potri.010G230600 K11252 - histone H2B (H2B) Chr10 + View
Populus trichocarpa Potri.009G028001 K11252 - histone H2B (H2B) Chr09 + View
Phaseolus vulgaris Phvul.011G066100 K11252 - histone H2B (H2B) Chr11 - View
Quercus lobata QL08p053084 8 - View
Quercus lobata QL01p033010 1 - View
Rhododendron simsii Rhsim13G0085200 chr13 + View
Striga asiatica SGA_v2.0_scaffold277G46700 scaffold277 + View
Striga asiatica SGA_v2.0_scaffold83G26458 scaffold83 + View
Salix brachista Sabra09G0019100 GWHAAZH00000009 + View
Salix brachista Sabra10G0178900 GWHAAZH00000010 + View
Simmondsia chinensis Sc02g0001440 GWHAASQ00000002 + View
Sechium edule Sed0003837 LG03 - View
Schrenkiella parvula Sp5g15570 K11252 - histone H2B (H2B) ch5-1 + View
Schrenkiella parvula Sp6g22520 K11252 - histone H2B (H2B) ch6-6 + View
Solanum pennellii Sopen06g031190 Histone superfamily protein | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleus, nucleosome | EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis | CONTAINS InterPro DOMAIN/s: Histone H2B , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen06g032230 Histone H2B - Gossypium hirsutum (Upland cotton), Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. | histone B2 (HTB2) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleolus, nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2B , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen11g003790 Histone H2B - Gossypium hirsutum (Upland cotton), HTB4 | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleolus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2B , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch11 - View
Solanum pennellii Sopen11g026180 Histone H2B - Gossypium hirsutum (Upland cotton), Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. | histone B2 (HTB2) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleolus, nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2B , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400007131 Histone H2B ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400000420 Histone H2B.2 ST4.03ch11 + View
Trochodendron aralioides TAR369G0604 group18 + View
Trochodendron aralioides TAR636G0296 group1 + View
Trochodendron aralioides TAR623G1616 group7 + View
Theobroma cacao Thecc.10G089700 Histone superfamily protein Chromosome_10 + View
Theobroma cacao Thecc.09G326200 Histone superfamily protein Chromosome_9 - View
Theobroma cacao Thecc.05G044700 Histone superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104806577 histone H2B.9-like NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104799465 histone H2B.7-like NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104810811 histone H2B.11-like NW_010965304.1 + View
Tripterygium wilfordii TWI53G1269 NC_052244.1 - View
Tripterygium wilfordii TWI75G0743 NC_052253.1 + View
Tripterygium wilfordii TWI15G0450 NC_052247.1 - View
Tripterygium wilfordii TWI79G0631 NC_052238.1 + View
Tripterygium wilfordii TWI74G1395 NC_052234.1 + View
Vaccinium macrocarpon vmacro03247 Similar to ATL57: RING-H2 finger protein ATL57 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G0187 CM024076.1 - View