Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG6G8450 | LG-6 | - | View | |
Acer truncatum | Atru.chr13.1806 | chr13 | + | View | |
Arabidopsis lyrata | AL1G48940 | scaffold_1 | - | View | |
Avicennia marina | MSTRG.1511 | ScioBoG_102833_HRSCAF_103052 | - | View | |
Amaranthus hybridus | Ah.05g177990 | Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (Zinc finger protein STOP1) | AmaHy_arrow1_Scaffold_5 | - | View |
Arabidopsis thaliana | AT1G34380 | 5'-3' exonuclease family protein 5'-3' exonuclease family protein%3B FUNCTIONS IN: 5'-3' exonuclease activity%2C DNA binding%2C catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: 5%26apos%3B-3%26apos%3B exonuclease%2C N-terminal resolvase-like domain (InterPro:IPR020046)%3B BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5)%3B Has 7465 Blast hits to 7465 proteins in 2316 species: Archae - 0%3B Bacteria - 5303%3B Metazoa - 1%3B Fungi - 0%3B Plants - 91%3B Viruses - 21%3B Other Eukaryotes - 2049 (source: NCBI BLink). 5'-3' exonuclease family protein%3B FUNCTIONS IN: 5'-3' exonuclease activity%2C DNA binding%2C catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: 5%26apos%3B-3%26apos%3B exonuclease%2C SAM-fold domain (InterPro:IPR020047)%2C 5%26apos%3B-3%26apos%3B exonuclease%2C C-terminal subdomain (InterPro:IPR020045)%2C 5%26apos%3B-3%26apos%3B exonuclease%2C N-terminal resolvase-like domain (InterPro:IPR020046)%3B BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT3G52050.5)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr1 | - | View |
Brassica carinata | BcaC08g43776 | ChrC08 | + | View | |
Brassica carinata | BcaB07g33127 | ChrB07 | + | View | |
Brassica napus | A09p32090 | A09 | + | View | |
Brassica oleracea | BolC6t36287H | C6 | + | View | |
Brassica rapa | BraA09t38748Z | A09 | + | View | |
Beta vulgaris | EL10Ac1g00070 | PTHR10133//PTHR10133:SF38 - DNA POLYMERASE I // 5'-3' EXONUCLEASE FAMILY PROTEIN | Chr1_EL10_PGA_scaffold3 | - | View |
Camellia sinensis var. sinensis | CSS0046436 | hypothetical protein JCGZ_05385 [Jatropha curcas] | Chr4 | - | View |
Capsicum annuum | CAN.G61.32 | PGAv.1.6.scaffold61 | - | View | |
Corylus avellana | Haze_17917 | Protein of unknown function | 7 | - | View |
Citrus clementina | Ciclev10001512m.g | scaffold_5 | + | View | |
Ceratophyllum demersum | CDE06G1238 | 4 | - | View | |
Cardamine hirsuta | CARHR033840 | DNA polymerase I, putative | Chr1 | - | View |
Carya illinoinensis | CiPaw.16G062400 | PTHR10133//PTHR10133:SF38 - DNA POLYMERASE I // 5'-3' EXONUCLEASE FAMILY PROTEIN | Chr16 | + | View |
Cucumis melo | MELO3C008115.2 | 5'-3' exonuclease | chr03 | - | View |
Carica papaya | Cpa.g.sc66.54 | supercontig_66 | + | View | |
Chenopodium quinoa | AUR62023576 | aq_1628: 5'-3' exonuclease | C_Quinoa_Scaffold_1606 | + | View |
Chenopodium quinoa | AUR62004659 | aq_1628: 5'-3' exonuclease | C_Quinoa_Scaffold_4250 | + | View |
Cucumis sativus L. | CsaV3_2G033430 | DNA polymerase I, putative | chr2 | - | View |
Davidia involucrata | Dinv41690 | GWHABJS00000002 | + | View | |
Durio zibethinus | Duzib177G0330 | NW_019168004.1 | - | View | |
Eucalyptus grandis | Eucgr.F04135 | Chr06 | + | View | |
Erythranthe guttata | Migut.C01243 | scaffold_3 | - | View | |
Fragaria x ananassa | FAN20G1782 | PTHR10133//PTHR10133:SF38 - DNA POLYMERASE I // 5'-3' EXONUCLEASE FAMILY PROTEIN | Fvb2-3 | - | View |
Fragaria x ananassa | FAN27G0258 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | Fvb2-1 | + | View |
Fragaria x ananassa | FAN24G2303 | PTHR10133//PTHR10133:SF38 - DNA POLYMERASE I // 5'-3' EXONUCLEASE FAMILY PROTEIN | Fvb2-2 | - | View |
Fragaria vesca | FvH4_2g12160 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | Fvb2 | + | View |
Glycine max | Glyma.16G156300 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | Gm16 | + | View |
Glycine max | Glyma.02G074400 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | Gm02 | + | View |
Lupinus albus | Lalb_Chr03g0035881 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | Lalb_Chr03 | - | View |
Lotus japonicus | Lj2g0016315 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | chr2 | - | View |
Lonicera japonica | Lj7A293G47 | GWHAAZE00000007 | - | View | |
Magnolia biondii | MBI17_g15293_MAGBIO | AED:0.07 | Chr17 | + | View |
Malus domestica | MD10G1046800 | 5'-3' exonuclease family protein | Chr10 | - | View |
Malus domestica | MD05G1040800 | 5'-3' exonuclease family protein | Chr05 | - | View |
Manihot esculenta | Manes.18G100000 | Chromosome18 | - | View | |
Nicotiana tabacum | Nitab4.5_0000159g0230 | 5'-3' exonuclease, C-terminal domain, 5'-3' exonuclease, alpha-helical arch, N-terminal, 5'-3' exonuclease, N-terminal | Nitab4.5_0000159 | - | View |
Petunia axillaris | Peaxi162Scf00495g00015 | 5'-3' exonuclease family protein | Peaxi162Scf00495 | - | View |
Punica granatum | PGR102G3248 | NC_045129.1 | + | View | |
Prunus persica | Prupe.8G055700 | Pp08 | - | View | |
Populus trichocarpa | Potri.013G114400 | PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN | Chr13 | + | View |
Quercus lobata | QL02p034064 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr6g0272141 | RcHm_v2.0_Chr6 | + | View | |
Rhododendron simsii | Rhsim06G0097100 | chr06 | + | View | |
Striga asiatica | SGA_v2.0_scaffold118G32466 | scaffold118 | - | View | |
Salix brachista | Sabra13G0096800 | GWHAAZH00000013 | + | View | |
Simmondsia chinensis | Sc23g0001130 | GWHAASQ00000023 | - | View | |
Sechium edule | Sed0004103 | LG03 | + | View | |
Solanum pennellii | Sopen11g009130 | 5-3 exonuclease family protein | FUNCTIONS IN: 5-3 exonuclease activity, DNA binding, catalytic activity | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 5, apos, -3, apos | exonuclease, SAM-fold domain , 5, apos, -3, apos | exonuclease, C-terminal subdomain , 5, apos, -3, apos | exonuclease, N-terminal resolvase-like domain | BEST Arabidopsis thaliana protein match is: 5-3 exonuclease family protein | Spenn-ch11 | - | View |
Solanum tuberosum | PGSC0003DMG400009236 | DNA polymerase I 3'-5' exo domain | ST4.03ch11 | + | View |
Selenicereus undatus | Hund27079 | Scaffold_2055 | - | View | |
Trochodendron aralioides | TAR381G0932 | group11 | - | View | |
Theobroma cacao | Thecc.08G202800 | 5'-3' exonuclease family protein | Chromosome_8 | - | View |
Tripterygium wilfordii | TWI60G0628 | NC_052246.1 | + | View | |
Vaccinium macrocarpon | vmacro12496 | Similar to aq_1628: 5'-3' exonuclease (Aquifex aeolicus (strain VF5) OX%3D224324) | chr11_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01034499001 | chr18 | - | View |