Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc01g105800.4 MADS-box protein JOINTLESS (AHRD V3.3 *** A0A2G3AWN8_CAPCH) SL4.0ch01 + View
Solyc04g076280.4 MADS-box protein SVP (AHRD V3.3 *** A0A2G3CP45_CAPCH) SL4.0ch04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G14270 LG-7 - View
Acer truncatum Atru.chr3.1252 chr3 - View
Acer truncatum Atru.chr13.1018 chr13 - View
Acer truncatum Atru.chr6.1251 chr6 + View
Actinidia chinensis Actinidia01161 Lachesis_group2 + View
Actinidia chinensis Actinidia19238 Lachesis_group28 - View
Actinidia chinensis Actinidia10277 Lachesis_group26 - View
Arabidopsis lyrata AL4G12080 scaffold_4 + View
Avicennia marina MSTRG.23376 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.05g170830 AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy5G01303 CHR05 - View
Aquilegia oxysepala Aqoxy6G00651 CHR06 - View
Aquilegia oxysepala Aqoxy6G01437 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KHU32P PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6TV8QX PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G922MD PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D3LV4V KOG0014 - MADS box transcription factor arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UK37ES PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5R195S PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT2G22540 K-box region and MADS-box transcription factor family protein Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. SHORT VEGETATIVE PHASE (SVP)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1)%3B Has 7469 Blast hits to 7448 proteins in 905 species: Archae - 3%3B Bacteria - 14%3B Metazoa - 824%3B Fungi - 324%3B Plants - 6168%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB03g12322 ChrB03 + View
Brassica carinata BcaB08g35097 ChrB08 + View
Brassica napus C04p51780 C04 + View
Brassica napus A04p17050 A04 + View
Brassica napus A01p01110 A01 + View
Brassica napus C08p40520 C08 - View
Brassica napus A09p57360 A09 - View
Brassica oleracea BolC7t45857H C7 - View
Brassica oleracea BolC8t51614H C8 - View
Brassica rapa BraA09t41129Z A09 - View
Brassica rapa BraA04t17334Z A04 + View
Brassica rapa BraA08t34258Z A08 - View
Beta vulgaris EL10Ac6g15210 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0037110 PREDICTED: MADS-box protein JOINTLESS-like [Nicotiana sylvestris] Chr1 - View
Camellia sinensis var. sinensis CSS0003691 MADS-box transcription factor protein 2 [Camellia sinensis] Chr13 - View
Camellia sinensis var. sinensis CSS0008173 SVP1 protein [Camellia sinensis] Chr9 + View
Capsicum annuum CAN.G1344.3 PGAv.1.6.scaffold1344 + View
Cannabis sativa CANSAT11G2290 NC_044377.1 - View
Cicer arietinum L. Ca_22604_v3 Ca_LG7_v3 + View
Corylus avellana Haze_10525 Similar to J: MADS-box protein JOINTLESS (Solanum lycopersicum OX%3D4081) 9 - View
Corylus avellana Haze_22450 Similar to SVP: MADS-box protein SVP (Arabidopsis thaliana OX%3D3702) 3 + View
Corylus avellana Haze_03866 Similar to J: MADS-box protein JOINTLESS (Solanum lycopersicum OX%3D4081) 2 + View
Coffea canephora Cc10_g15850 MADS-box protein SVP chr10 + View
Coffea canephora Cc07_g14150 MADS-box protein SVP chr7 - View
Citrus clementina Ciclev10026457m.g scaffold_7 - View
Citrus clementina Ciclev10002707m.g scaffold_5 - View
Ceratophyllum demersum CDE10G1031 8 - View
Carpinus fangiana Cfa005704 Cfa02 + View
Carpinus fangiana Cfa006887 Cfa02 - View
Cardamine hirsuta CARHR113740 MADS-box transcription factor Chr4 + View
Carya illinoinensis CiPaw.07G047900 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr07 - View
Carya illinoinensis CiPaw.07G166000 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Chr07 - View
Carya illinoinensis CiPaw.08G055400 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr08 + View
Carya illinoinensis CiPaw.06G157400 PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) Chr06 + View
Cucumis melo MELO3C011093.2 MADS box protein chr03 + View
Corchorus olitorius COL.COLO4_27350 Transcription factor%2C MADS-box AWUE01019531.1 + View
Carica papaya Cpa.g.sc55.31 supercontig_55 - View
Carica papaya Cpa.g.sc21.11 supercontig_21 + View
Chenopodium quinoa AUR62017967 J: MADS-box protein JOINTLESS C_Quinoa_Scaffold_3086 + View
Chenopodium quinoa AUR62012889 SVP: MADS-box protein SVP C_Quinoa_Scaffold_1040 - View
Chenopodium quinoa AUR62019043 AGL24: MADS-box protein AGL24 C_Quinoa_Scaffold_3876 + View
Chenopodium quinoa AUR62003658 J: MADS-box protein JOINTLESS C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0004s0171 PTHR11945:SF179 - MADS-BOX PROTEIN SVP scaffold_4 + View
Cucumis sativus L. CsaV3_2G030300 MADS-box protein like chr2 - View
Daucus carota DCAR_014188 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv24150 GWHABJS00000005 - View
Davidia involucrata Dinv15994 GWHABJS00000002 + View
Davidia involucrata Dinv13608 GWHABJS00000014 - View
Davidia involucrata Dinv44857 GWHABJS00000002 + View
Durio zibethinus Duzib147G0199 NW_019168470.1 + View
Durio zibethinus Duzib187G1592 NW_019167860.1 + View
Durio zibethinus Duzib264G0661 NW_019167960.1 + View
Durio zibethinus Duzib093G0029 NW_019167937.1 + View
Erigeron canadensis ECA238G2163 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA246G3833 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.I00556 Chr09 - View
Erythranthe guttata Migut.H02293 scaffold_8 - View
Eutrema salsugineum Thhalv10000308m.g PTHR11945:SF179 - MADS-BOX PROTEIN SVP scaffold_15 + View
Fragaria x ananassa FAN19G2039 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Fvb1-4 - View
Fragaria x ananassa FAN26G0879 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb1-2 - View
Fragaria x ananassa FAN23G1738 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb1-3 - View
Fragaria x ananassa FAN28G2287 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb1-1 + View
Fragaria x ananassa FAN08G1870 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Fvb5-3 + View
Fragaria x ananassa FAN26G2764 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Fvb1-2 + View
Fragaria x ananassa FAN04G2310 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Fvb5-4 - View
Fragaria x ananassa FAN13G1912 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb5-2 - View
Fragaria x ananassa FAN18G4026 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Fvb5-1 - View
Fragaria vesca FvH4_1g19710 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb1 - View
Fragaria vesca FvH4_5g35400 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb5 - View
Gossypium hirsutum Gohir.D12G081800 PTHR11945:SF179 - MADS-BOX PROTEIN SVP D12 - View
Gossypium hirsutum Gohir.A12G084200 PTHR11945:SF179 - MADS-BOX PROTEIN SVP A12 + View
Glycine max Glyma.06G095700 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Gm06 - View
Glycine max Glyma.19G034500 PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm19 + View
Glycine max Glyma.15G057900 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Gm15 + View
Glycine max Glyma.02G041500 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Gm02 + View
Gossypium raimondii Gorai.005G225500 Chr05 + View
Gossypium raimondii Gorai.007G237300 Chr07 - View
Gossypium raimondii Gorai.008G092300 Chr08 + View
Lupinus albus Lalb_Chr11g0064831 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr11 - View
Lupinus albus Lalb_Chr05g0216321 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Lalb_Chr05 + View
Lupinus albus Lalb_Chr17g0344511 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Lalb_Chr17 + View
Lonicera japonica Lj2A534T39 GWHAAZE00000002 - View
Lonicera japonica Lj4C88G16 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_3_62800 PF00319//PF01486//PF06839 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // K-box region (K-box) // GRF zinc finger (zf-GRF) Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_2_70640 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_6_105061 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_9_75300 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI06_g07363_MAGBIO AED:0.14 Chr06 - View
Malus domestica MD15G1313200 K-box region and MADS-box transcription factor family protein Chr15 - View
Malus domestica MD08G1196900 K-box region and MADS-box transcription factor family protein Chr08 + View
Malus domestica MD01G1038600 K-box region and MADS-box transcription factor family protein Chr01 + View
Malus domestica MD15G1384500 AGAMOUS-like 24 Chr15 - View
Manihot esculenta Manes.02G145300 Chromosome02 + View
Manihot esculenta Manes.10G099000 Chromosome10 - View
Manihot esculenta Manes.12G126800 Chromosome12 - View
Medicago truncatula Medtr5g066180 MADS-box transcription factor chr5 + View
Medicago truncatula Medtr5g032150 MADS-box transcription factor chr5 - View
Nelumbo nucifera Nn5g29891 chr5 - View
Nelumbo nucifera Nn1g05562 chr1 + View
Nicotiana tabacum Nitab4.5_0001468g0090 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0001468 + View
Nicotiana tabacum Nitab4.5_0004153g0060 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0004153 + View
Nicotiana tabacum Nitab4.5_0000902g0340 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0000902 + View
Olea europaea Oeu046544.1 chr10 - View
Olea europaea Oeu012464.1 chr18 - View
Petunia axillaris Peaxi162Scf00299g00717 MADS-box transcription factor 47 Peaxi162Scf00299 - View
Punica granatum PGR042G3870 NC_045130.1 + View
Prunus persica Prupe.8G069300 Pp08 + View
Prunus persica Prupe.1G531100 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Pp01 + View
Prunus persica Prupe.6G199000 Pp06 + View
Pisum sativum Psat7g100960 MADS domain signature chr7LG7 + View
Populus trichocarpa Potri.017G044200 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr17 - View
Populus trichocarpa Potri.007G010800 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr07 - View
Populus trichocarpa Potri.002G105600 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr02 + View
Phaseolus vulgaris Phvul.002G212450 Chr02 + View
Phaseolus vulgaris Phvul.002G147600 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr02 - View
Quercus lobata QL06p035702 6 + View
Quercus lobata QL11p024222 11 + View
Quercus lobata QL09p017707 9 + View
Rosa chinensis RcHm_v2.0_Chr2g0111271 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0016300 chr08 + View
Striga asiatica SGA_v2.0_scaffold45G17235 scaffold45 - View
Striga asiatica SGA_v2.0_scaffold83G26372 scaffold83 + View
Striga asiatica SGA_v2.0_scaffold108G30915 scaffold108 + View
Salvia bowleyana SalBow3G2396 GWHASIU00000006 - View
Salix brachista Sabra07G0008300 GWHAAZH00000007 - View
Salix brachista Sabra17G0030200 GWHAAZH00000017 - View
Salix brachista Sabra02G0082900 GWHAAZH00000002 + View
Simmondsia chinensis Sc26g0000580 GWHAASQ00000026 + View
Simmondsia chinensis Sc23g0000710 GWHAASQ00000023 + View
Simmondsia chinensis Sc03g0000300 GWHAASQ00000003 + View
Sechium edule Sed0012619 LG03 - View
Sechium edule Sed0017033 LG14 + View
Schrenkiella parvula Sp4g01590 PTHR11945:SF179 - MADS-BOX PROTEIN SVP ch4-1 + View
Solanum pennellii Sopen01g048260 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. | SHORT VEGETATIVE PHASE (SVP) | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 Spenn-ch01 + View
Solanum pennellii Sopen11g005370 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. | SHORT VEGETATIVE PHASE (SVP) | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400033570 MADS transcriptional factor ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400016203 MADS-box protein JOINTLESS ST4.03ch11 - View
Selenicereus undatus Hund16536 Scaffold_33677 - View
Selenicereus undatus Hund27019 Scaffold_2055 + View
Trochodendron aralioides TAR625G0300 group4 - View
Trochodendron aralioides TAR381G1243 group11 - View
Trochodendron aralioides TAR628G1136 group5 + View
Trochodendron aralioides TAR376G0963 group14 + View
Theobroma cacao Thecc.02G129600 MIKC mads-box transcription factor Chromosome_2 - View
Theobroma cacao Thecc.08G070300 K-box region and MADS-box transcription factor family protein Chromosome_8 + View
Theobroma cacao Thecc.01G091300 K-box region and MADS-box transcription factor family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104824912 MADS-box protein SVP-like NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104807663 agamous-like MADS-box protein AGL21 NW_010963495.1 - View
Trifolium pratense TPR.G2836 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI12G1419 NC_052243.1 + View
Tripterygium wilfordii TWI53G0436 NC_052244.1 + View
Tripterygium wilfordii TWI74G0627 NC_052234.1 - View
Vaccinium macrocarpon vmacro21337 Similar to SVP: MADS-box protein SVP (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0475 CM024074.1 - View
Vitis vinifera GSVIVG01005934001 chrUn - View
Vitis vinifera GSVIVG01009171001 chr18 + View