Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr3.1368 | chr3 | + | View | |
Actinidia chinensis | Actinidia28851 | Lachesis_group8 | - | View | |
Arabidopsis lyrata | AL8G42820 | scaffold_8 | - | View | |
Avicennia marina | MSTRG.3765 | ScioBoG_102836_HRSCAF_103072 | + | View | |
Aquilegia oxysepala | Aqoxy6G00740 | CHR06 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.XUU5QY | PTHR24012//PTHR24012:SF436//PTHR36408//PTHR36408:SF1 - FAMILY NOT NAMED // PABPN1 PROTEIN // FAMILY NOT NAMED // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.M2T0M7 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | arahy.Tifrunner.gnm1.Arahy.20 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.A3Z183 | PTHR24012//PTHR24012:SF436//PTHR36408 - FAMILY NOT NAMED // PABPN1 PROTEIN // FAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.EC9EW7 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | arahy.Tifrunner.gnm1.Arahy.10 | + | View |
Arabidopsis thaliana | AT5G65260 | RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G10350.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | - | View |
Brassica carinata | BcaC03g18321 | ChrC03 | - | View | |
Brassica napus | C02p63970 | C02 | - | View | |
Brassica napus | A02p43810 | A02 | - | View | |
Brassica napus | C03p60820 | C03 | + | View | |
Brassica napus | A06p32120 | A06 | - | View | |
Brassica oleracea | BolC2t12463H | C2 | - | View | |
Brassica rapa | BraA02t09305Z | A02 | - | View | |
Brassica rapa | BraA06t26140Z | A06 | - | View | |
Camellia sinensis var. sinensis | CSS0049658 | unnamed protein product [Coffea canephora] | Chr1 | + | View |
Cannabis sativa | CANSAT11G2095 | NC_044377.1 | + | View | |
Cicer arietinum L. | Ca_17755_v3 | Ca_LG6_v3 | - | View | |
Corylus avellana | Haze_10594 | Similar to PABN2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) | 9 | + | View |
Corylus avellana | Haze_24870 | Similar to PABN2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) | 8 | + | View |
Coffea canephora | Cc07_g14780 | Polyadenylate-binding protein 2 | chr7 | + | View |
Citrus clementina | Ciclev10026448m.g | scaffold_7 | + | View | |
Carpinus fangiana | Cfa002621 | Cfa01 | + | View | |
Cardamine hirsuta | CARHR202950 | Polyadenylate-binding protein family protein | Chr6 | + | View |
Cardamine hirsuta | CARHR279210 | Polyadenylate-binding protein family protein | Chr8 | - | View |
Carya illinoinensis | CiPaw.03G144200 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Chr03 | - | View |
Citrullus lanatus | ClCG01G018630 | Polyadenylate-binding protein family protein | CG_Chr01 | + | View |
Cucumis melo | MELO3C017602.2 | Polyadenylate-binding 2 | chr07 | - | View |
Cucumis melo | MELO3C007743.2 | Polyadenylate-binding 2 | chr08 | + | View |
Corchorus olitorius | COL.COLO4_27278 | hypothetical protein | AWUE01019526.1 | - | View |
Carica papaya | Cpa.g.sc55.85 | supercontig_55 | + | View | |
Chenopodium quinoa | AUR62013153 | PABN3: Polyadenylate-binding protein 3 | C_Quinoa_Scaffold_1040 | + | View |
Capsella rubella | Carub.0008s2613 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | scaffold_8 | - | View |
Cucumis sativus L. | CsaV3_6G045300 | Polyadenylate-binding protein 2 | chr6 | + | View |
Cucumis sativus L. | CsaV3_UNG128990 | Polyadenylate-binding protein 2 | scaffold66 | + | View |
Cucumis sativus L. | CsaV3_UNG223550 | Polyadenylate-binding protein 2 | scaffold69 | - | View |
Daucus carota | DCAR_003497 | hypothetical protein | DCARv2_Chr1 | - | View |
Davidia involucrata | Dinv08843 | GWHABJS00000021 | + | View | |
Davidia involucrata | Dinv13217 | GWHABJS00000014 | + | View | |
Durio zibethinus | Duzib264G0343 | NW_019167960.1 | - | View | |
Durio zibethinus | Duzib187G0072 | NW_019167860.1 | - | View | |
Durio zibethinus | Duzib132G0232 | NW_019167915.1 | + | View | |
Eucalyptus grandis | Eucgr.I00520 | Chr09 | + | View | |
Erythranthe guttata | Migut.L00149 | scaffold_12 | - | View | |
Eutrema salsugineum | Thhalv10004890m.g | scaffold_6 | + | View | |
Eutrema salsugineum | Thhalv10014635m.g | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | scaffold_2 | - | View |
Fragaria x ananassa | FAN19G2293 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Fvb1-4 | + | View |
Fragaria x ananassa | FAN23G3010 | Fvb1-3 | + | View | |
Fragaria x ananassa | FAN28G0303 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Fvb1-1 | - | View |
Fragaria x ananassa | FAN26G0703 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Fvb1-2 | + | View |
Fragaria vesca | FvH4_1g20430 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Fvb1 | + | View |
Gossypium hirsutum | Gohir.D03G039700 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | D03 | - | View |
Gossypium hirsutum | Gohir.A02G128200 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | A02 | - | View |
Gossypium hirsutum | Gohir.D13G053300 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | D13 | + | View |
Glycine max | Glyma.05G176400 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Gm05 | + | View |
Glycine max | Glyma.08G133900 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Gm08 | + | View |
Glycine max | Glyma.15G054800 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Gm15 | - | View |
Gossypium raimondii | Gorai.003G040800 | Chr03 | - | View | |
Hydrangea macrophylla | Hma1.2p1_0019F.1_g013640 | Hma1.2p1_0019F.1 | - | View | |
Lupinus albus | Lalb_Chr07g0185281 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Lalb_Chr07 | - | View |
Lotus japonicus | Lj4g0023301 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | chr4 | - | View |
Lonicera japonica | Lj4C898G2 | GWHAAZE00000004 | - | View | |
Lonicera japonica | Lj5A235T48 | GWHAAZE00000005 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_5_33860 | Lsat_1_v8_lg_5 | + | View | |
Malus domestica | MD01G1034000 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr01 | - | View |
Manihot esculenta | Manes.12G131600 | Chromosome12 | + | View | |
Manihot esculenta | Manes.10G105142 | Chromosome10 | + | View | |
Manihot esculenta | Manes.07G034000 | Chromosome07 | - | View | |
Manihot esculenta | Manes.13G095800 | Chromosome13 | - | View | |
Medicago truncatula | Medtr8g089990 | polyadenylate-binding protein II | chr8 | + | View |
Nelumbo nucifera | Nn5g30032 | chr5 | + | View | |
Nelumbo nucifera | Nn1g05423 | chr1 | - | View | |
Olea europaea | Oeu032405.1 | chr20 | + | View | |
Olea europaea | Oeu002166.1 | chr14 | + | View | |
Punica granatum | PGR004G2141 | NC_045131.1 | - | View | |
Prunus persica | Prupe.6G191400 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Pp06 | - | View |
Pisum sativum | Psat7g056840 | RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) | chr7LG7 | - | View |
Papaver somniferum | PSO447G0151 | NW_020621936.1 | - | View | |
Papaver somniferum | PSO210G3552 | NC_039359.1 | + | View | |
Populus trichocarpa | Potri.005G073200 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Chr05 | + | View |
Populus trichocarpa | Potri.007G095800 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Chr07 | - | View |
Phaseolus vulgaris | Phvul.002G261500 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | Chr02 | + | View |
Quercus lobata | QL11p022616 | 11 | - | View | |
Quercus lobata | QL06p048439 | 6 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0112681 | RcHm_v2.0_Chr2 | + | View | |
Rhododendron simsii | Rhsim10G0164900 | chr10 | - | View | |
Striga asiatica | SGA_v2.0_scaffold335G49110 | scaffold335 | + | View | |
Salix brachista | Sabra07G0078900 | GWHAAZH00000007 | - | View | |
Salix brachista | Sabra05G0059800 | GWHAAZH00000005 | + | View | |
Simmondsia chinensis | Sc03g0000080 | GWHAASQ00000003 | + | View | |
Simmondsia chinensis | Sc16g0000190 | GWHAASQ00000016 | + | View | |
Sechium edule | Sed0017052 | LG13 | - | View | |
Sechium edule | Sed0023811 | LG10 | + | View | |
Schrenkiella parvula | Sp2g28360 | K14396 - polyadenylate-binding protein 2 (PABPN1, PABP2) | ch2-4 | - | View |
Solanum pennellii | Sopen11g004880 | RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein | Spenn-ch11 | - | View |
Solanum pennellii | Sopen05g029970 | RNA-binding (RRM/RBD/RNP motifs) family protein | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein . | Spenn-ch05 | + | View |
Solanum tuberosum | PGSC0003DMG400016158 | Poly-A binding protein | ST4.03ch11 | + | View |
Solanum tuberosum | PGSC0003DMG400016798 | Poly-A binding protein | ST4.03ch05 | + | View |
Selenicereus undatus | Hund13597 | Scaffold_33679 | - | View | |
Trochodendron aralioides | TAR381G0760 | group11 | + | View | |
Trochodendron aralioides | TAR376G0353 | group14 | - | View | |
Theobroma cacao | Thecc.01G097500 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chromosome_1 | + | View |
Theobroma cacao | Thecc.02G134700 | RNA-binding family protein | Chromosome_2 | + | View |
Tarenaya hassleriana | THA.LOC104801673 | polyadenylate-binding protein 3 | NW_010969839.1 | - | View |
Tarenaya hassleriana | THA.LOC104798864 | polyadenylate-binding protein 2 isoform X1 | NW_010960188.1 | + | View |
Trifolium pratense | TPR.G6252 | Tp57577_TGAC_v2_LG3 | + | View | |
Tripterygium wilfordii | TWI74G0657 | NC_052234.1 | + | View | |
Tripterygium wilfordii | TWI77G0568 | NC_052236.1 | + | View | |
Vaccinium macrocarpon | vmacro12967 | Similar to PABN3: Polyadenylate-binding protein 3 (Arabidopsis thaliana OX%3D3702) | chr11_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0251G1244 | CM024069.1 | + | View |