Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc04g074160.3 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q9V5_9MAGN) SL4.0ch04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15310 LG-6 - View
Actinidia chinensis Actinidia06555 Lachesis_group16 + View
Actinidia chinensis Actinidia20005 Lachesis_group11 - View
Arabidopsis lyrata AL7G12220 scaffold_7 + View
Arabidopsis thaliana AT4G39952 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G03580.1)%3B Has 47712 Blast hits to 13890 proteins in 262 species: Archae - 2%3B Bacteria - 17%3B Metazoa - 157%3B Fungi - 156%3B Plants - 46708%3B Viruses - 0%3B Other Eukaryotes - 672 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC07g41098 ChrC07 - View
Brassica napus C01p00970 C01 + View
Brassica napus A01p00840 A01 + View
Brassica oleracea BolC8t51666H C8 - View
Brassica rapa BraA09t41173Z A09 - View
Beta vulgaris EL10Ac6g14851 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G1177.5 PGAv.1.6.scaffold1177 - View
Corylus avellana Haze_24901 Similar to PCMP-E98: Pentatricopeptide repeat-containing protein At4g39952, mitochondrial (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc07_g14990 Pentatricopeptide repeat-containing protein At4g39952, mitochondrial chr7 - View
Coffea canephora Cc01_g00710 Putative Pentatricopeptide repeat-containing protein At4g21300 chr1 + View
Carpinus fangiana Cfa002636 Cfa01 - View
Cardamine hirsuta CARHR246740 Pentatricopeptide repeat-containing protein Chr7 - View
Carya illinoinensis CiPaw.04G101200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr04 + View
Cucumis melo MELO3C011009.2 Pentatricopeptide repeat-containing family protein chr03 - View
Chenopodium quinoa AUR62013136 PCMP-E43: Putative pentatricopeptide repeat-containing protein At3g47840 C_Quinoa_Scaffold_1040 - View
Chenopodium quinoa AUR62027245 PCMP-H21: Pentatricopeptide repeat-containing protein At1g20230 C_Quinoa_Scaffold_2924 - View
Capsella rubella Carub.0007s0190 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_7 + View
Durio zibethinus Duzib147G1494 NW_019168470.1 + View
Erythranthe guttata Migut.F02017 scaffold_6 + View
Erythranthe guttata Migut.F01814 scaffold_6 + View
Eutrema salsugineum Thhalv10000053m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_15 + View
Fragaria x ananassa FAN04G0914 PF13041 - PPR repeat family (PPR_2) Fvb5-4 - View
Fragaria x ananassa FAN19G0504 Fvb1-4 - View
Fragaria x ananassa FAN23G0875 PF01535 - PPR repeat (PPR) Fvb1-3 - View
Fragaria vesca FvH4_1g20620 Fvb1 - View
Gossypium hirsutum Gohir.A11G051700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A11 - View
Gossypium hirsutum Gohir.D11G055100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D11 - View
Glycine max Glyma.02G205866 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm02 - View
Gossypium raimondii Gorai.007G060400 Chr07 - View
Lonicera japonica Lj2P544T10 GWHAAZE00000002 - View
Malus domestica MD01G1032300 Pentatricopeptide repeat (PPR) superfamily protein Chr01 + View
Punica granatum PGR031G2967 NC_045127.1 + View
Punica granatum PGR102G2961 NC_045129.1 - View
Pisum sativum Psat7g056560 PPR repeat chr7LG7 + View
Quercus lobata QL06p048956 6 - View
Rhododendron simsii Rhsim05G0160200 chr05 - View
Simmondsia chinensis Sc23g0002190 GWHAASQ00000023 - View
Solanum pennellii Sopen11g004720 Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation. | CHLORORESPIRATORY REDUCTION 2 (CRR2) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400006407 Pentatricopeptide repeat-containing protein ST4.03ch04 + View
Tarenaya hassleriana THA.LOC104807686 pentatricopeptide repeat-containing protein At4g39952%2C mitochondrial NW_010963495.1 - View
Tripterygium wilfordii TWI74G0215 NC_052234.1 + View
Utricularia gibba unitig_899.g14530 unitig_899 + View
Vanilla planifolia HPP92_016355 Pentatricopeptide repeat-containing protein *-* CM028157.1 + View
Vitis vinifera GSVIVG01006977001 chrUn + View
Vitis vinifera GSVIVG01009047001 chr18 + View
Zea mays Zm00001eb315860 Zm00001e034445 Pentatricopeptide repeat-containing protein 7 + View