Gene: Sopen11g004720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004720
  • Transcript Identifier Sopen11g004720.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 3193394-3195355 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004720.1

Descriptions

  • Description Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation. | CHLORORESPIRATORY REDUCTION 2 (CRR2) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031426
ISO
PLAZA Integrative Orthologypolycistronic mRNA processing AT3G46790
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT3G46790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR032867 DYW domain
Mapman id Description
16.11.3.3.4.62 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CRR2)