Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG3G2930 | LG-3 | - | View | |
Acer truncatum | Atru.chr12.826 | chr12 | - | View | |
Actinidia chinensis | Actinidia06744 | Lachesis_group22 | - | View | |
Avicennia marina | MSTRG.8136 | ScioBoG_102841_HRSCAF_103114 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.KI2IUQ | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | arahy.Tifrunner.gnm1.Arahy.09 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.YE7AHB | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | arahy.Tifrunner.gnm1.Arahy.19 | + | View |
Brassica carinata | BcaC05g29474 | ChrC05 | + | View | |
Brassica napus | C05p57810 | C05 | + | View | |
Brassica napus | A05p38790 | A05 | + | View | |
Camellia sinensis var. sinensis | CSS0048192 | hypothetical protein PRUPE_ppa000731mg [Prunus persica] | Chr1 | + | View |
Capsicum annuum | CAN.G321.36 | PGAv.1.6.scaffold321 | - | View | |
Cicer arietinum L. | Ca_10550_v3 | Ca_LG4_v3 | + | View | |
Corylus avellana | Haze_16846 | Similar to APUM4: Pumilio homolog 4 (Arabidopsis thaliana OX%3D3702) | 11 | - | View |
Coffea canephora | Cc02_g11060 | Putative Pumilio homolog 4 | chr2 | + | View |
Citrus clementina | Ciclev10030594m.g | scaffold_4 | + | View | |
Cardamine hirsuta | CARHR084840 | pumilio 4 | Chr3 | - | View |
Carya illinoinensis | CiPaw.01G270100 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Chr01 | + | View |
Citrullus lanatus | ClCG05G021150 | pumilio 4 LENGTH=1003 | CG_Chr05 | - | View |
Cucumis melo | MELO3C012411.2 | pumilio homolog 4 | chr10 | - | View |
Carica papaya | Cpa.g.sc53.108 | supercontig_53 | - | View | |
Cucumis sativus L. | CsaV3_5G036100 | pumilio homolog 4 | chr5 | + | View |
Daucus carota | DCAR_006423 | hypothetical protein | DCARv2_Chr2 | + | View |
Davidia involucrata | Dinv31215 | GWHABJS00000004 | + | View | |
Durio zibethinus | Duzib128G0492 | NW_019168481.1 | - | View | |
Durio zibethinus | Duzib114G0399 | NW_019167926.1 | - | View | |
Erigeron canadensis | ECA238G3606 | Conyza_canadensis_scaffold:6 | + | View | |
Eucalyptus grandis | Eucgr.J01068 | Chr10 | + | View | |
Erythranthe guttata | Migut.F01724 | scaffold_6 | + | View | |
Eutrema salsugineum | Thhalv10019985m.g | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | scaffold_13 | + | View |
Fragaria x ananassa | FAN10G2666 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Fvb7-1 | + | View |
Fragaria x ananassa | FAN03G2168 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Fvb7-3 | - | View |
Fragaria x ananassa | FAN06G1094 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Fvb7-2 | + | View |
Fragaria x ananassa | FAN01G1297 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Fvb7-4 | - | View |
Fragaria x ananassa | FAN06G0037 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Fvb7-2 | + | View |
Fragaria x ananassa | FAN10G0639 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Fvb7-1 | + | View |
Fragaria vesca | FvH4_7g18910 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Fvb7 | + | View |
Glycine max | Glyma.20G181600 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Gm20 | - | View |
Glycine max | Glyma.10G209000 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Gm10 | + | View |
Helianthus annuus | HanXRQChr14g0456671 | Putative nucleic acid binding NABP; Armadillo-type fold | HanXRQChr14 | + | View |
Lupinus albus | Lalb_Chr06g0170351 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Lalb_Chr06 | + | View |
Lupinus albus | Lalb_Chr21g0313771 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Lalb_Chr21 | + | View |
Lotus japonicus | Lj5g0012554 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | chr5 | - | View |
Lactuca sativa | Lsat_1_v5_gn_2_112881 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Lsat_1_v8_lg_2 | + | View |
Malus domestica | MD01G1104900 | pumilio 4 | Chr01 | + | View |
Manihot esculenta | Manes.07G095500 | Chromosome07 | + | View | |
Manihot esculenta | Manes.10G049000 | Chromosome10 | - | View | |
Medicago truncatula | Medtr1g094630 | pumilio-family RNA-binding repeatprotein | chr1 | + | View |
Nicotiana tabacum | Nitab4.5_0004325g0040 | Pumilio RNA-binding repeat, Armadillo-type fold, Armadillo-like helical | Nitab4.5_0004325 | - | View |
Nicotiana tabacum | Nitab4.5_0006561g0050 | Pumilio RNA-binding repeat, Armadillo-like helical, Armadillo-type fold | Nitab4.5_0006561 | + | View |
Olea europaea | Oeu020825.2 | chr13 | - | View | |
Petunia axillaris | Peaxi162Scf00296g00722 | pumilio 4 | Peaxi162Scf00296 | + | View |
Petunia axillaris | Peaxi162Scf00253g00515 | pumilio 4 | Peaxi162Scf00253 | + | View |
Punica granatum | PGR044G1034 | NC_045134.1 | + | View | |
Prunus persica | Prupe.2G210200 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Pp02 | + | View |
Populus trichocarpa | Potri.008G036500 | PTHR12537//PTHR12537:SF71 - RNA BINDING PROTEIN PUMILIO-RELATED // PUMILIO HOMOLOG 4 | Chr08 | + | View |
Phaseolus vulgaris | Phvul.007G097100 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | Chr07 | - | View |
Quercus lobata | QL08p054951 | 8 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr1g0362841 | RcHm_v2.0_Chr1 | + | View | |
Rhododendron simsii | Rhsim03G0117500 | chr03 | + | View | |
Salix brachista | Sabra08G0024600 | GWHAAZH00000008 | + | View | |
Schrenkiella parvula | Sp3g08630 | PTHR12537:SF71 - PUMILIO HOMOLOG 4 | ch3-1 | - | View |
Solanum pennellii | Sopen11g004270 | Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 UTR of target mRNA transcripts. | pumilio 1 (PUM1) | FUNCTIONS IN: RNA binding, binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP , Pumilio RNA-binding repeat , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: pumilio 3 | Spenn-ch11 | + | View |
Solanum tuberosum | PGSC0003DMG401007428 | Pumilio | ST4.03ch11 | - | View |
Theobroma cacao | Thecc.10G079600 | Pumilio 4 | Chromosome_10 | - | View |
Tarenaya hassleriana | THA.LOC104816421 | pumilio homolog 4 | NW_010965775.1 | - | View |
Tripterygium wilfordii | TWI38G0492 | NC_052252.1 | + | View | |
Vaccinium macrocarpon | vmacro07127 | Similar to APUM4: Pumilio homolog 4 (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0720G0985 | CM024071.1 | + | View | |
Vitis vinifera | GSVIVG01016236001 | chr13 | - | View |