Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc12g014540.2 PHD finger protein (AHRD V3.3 *** A0A2G3CUI9_CAPCH) SL4.0ch12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.3536 chr2 - View
Actinidia chinensis Actinidia10753 Lachesis_group9 - View
Arabidopsis lyrata AL3G34000 scaffold_3 + View
Arabidopsis lyrata AL1G58280 scaffold_1 + View
Avicennia marina MSTRG.6962 ScioBoG_102840_HRSCAF_103099 - View
Amaranthus hybridus Ah.06g182200 PHD finger protein At3g20280 AmaHy_arrow1_Scaffold_6 + View
Aquilegia oxysepala Aqoxy1G04109 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9RR6WG PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WPCM0F PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT1G50620 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G20280.1)%3B Has 3714 Blast hits to 3101 proteins in 414 species: Archae - 4%3B Bacteria - 443%3B Metazoa - 1736%3B Fungi - 538%3B Plants - 319%3B Viruses - 13%3B Other Eukaryotes - 661 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G20280 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G50620.1)%3B Has 11431 Blast hits to 6184 proteins in 707 species: Archae - 24%3B Bacteria - 2884%3B Metazoa - 3648%3B Fungi - 2195%3B Plants - 284%3B Viruses - 200%3B Other Eukaryotes - 2196 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB07g33496 ChrB07 + View
Brassica oleracea BolC5t33127H C5 - View
Beta vulgaris EL10Ac4g07685 PTHR12321//PTHR12321:SF44 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0023200 unnamed protein product [Coffea canephora] Chr5 + View
Camellia sinensis var. sinensis CSS0006554 PREDICTED: uncharacterized protein LOC104877603 isoform X2 [Vitis vinifera] Chr7 + View
Camellia sinensis var. sinensis CSS0022956 PREDICTED: uncharacterized protein LOC104877603 isoform X2 [Vitis vinifera] Chr7 - View
Capsicum annuum CAN.G337.52 PGAv.1.6.scaffold337 + View
Cannabis sativa CANSAT11G1231 NC_044377.1 + View
Cicer arietinum L. Ca_06350_v3 Ca_LG2_v3 - View
Corylus avellana Haze_09750 Similar to At3g20280: PHD finger protein At3g20280 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g14350 Putative RING/FYVE/PHD zinc finger superfamily protein chr5 - View
Citrus clementina Ciclev10007504m.g scaffold_1 - View
Ceratophyllum demersum CDE06G2452 4 + View
Ceratophyllum demersum CDE04G3193 2 + View
Carpinus fangiana Cfa020273 Cfa08 + View
Cardamine hirsuta CARHR095900 PHD finger protein Chr3 + View
Carya illinoinensis CiPaw.11G195000 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Chr11 - View
Carya illinoinensis CiPaw.12G133900 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Chr12 - View
Citrullus lanatus ClCG10G005040 PHD finger family protein CG_Chr10 - View
Corchorus olitorius COL.COLO4_09741 hypothetical protein AWUE01014267.1 - View
Carica papaya Cpa.g.sc12.236 supercontig_12 - View
Chenopodium quinoa AUR62015886 At3g20280: PHD finger protein At3g20280 C_Quinoa_Scaffold_1529 - View
Chenopodium quinoa AUR62020337 At3g20280: PHD finger protein At3g20280 C_Quinoa_Scaffold_1373 + View
Capsella rubella Carub.0001s3966 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_3G004720 Phd finger protein chr3 - View
Daucus carota DCAR_022592 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_013201 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv40798 GWHABJS00000013 + View
Davidia involucrata Dinv22227 GWHABJS00000001 - View
Erigeron canadensis ECA240G3846 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA246G1209 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F03507 Chr06 + View
Erythranthe guttata Migut.M01703 scaffold_13 + View
Eutrema salsugineum Thhalv10011311m.g PTHR22884 - SET DOMAIN PROTEINS scaffold_7 - View
Fragaria x ananassa FAN11G1876 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Fvb3-4 + View
Fragaria x ananassa FAN25G1926 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN16G0173 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN21G2245 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria vesca FvH4_3g23572 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Fvb3 - View
Gossypium hirsutum Gohir.D08G034800 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED D08 - View
Gossypium hirsutum Gohir.A08G024300 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED A08 - View
Glycine max Glyma.02G295400 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Gm02 - View
Glycine max Glyma.14G018000 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Gm14 + View
Gossypium raimondii Gorai.004G032700 Chr04 - View
Helianthus annuus HanXRQChr13g0408281 Putative bromo adjacent homology (BAH) domain; Zinc finger, RING/FYVE/PHD-type HanXRQChr13 - View
Helianthus annuus HanXRQChr05g0159731 Putative bromo adjacent homology (BAH) domain; Zinc finger, PHD-type; Zinc finger, RING/FYVE/PHD-type HanXRQChr05 + View
Hydrangea macrophylla Hma1.2p1_1332F.1_g276160 Hma1.2p1_1332F.1 - View
Hydrangea macrophylla Hma1.2p1_0036F.1_g023080 Hma1.2p1_0036F.1 + View
Lupinus albus Lalb_Chr10g0107181 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lotus japonicus LjContig00272g0028044 PTHR12321//PTHR12321:SF44 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Contig00272 - View
Lonicera japonica Lj8A173T74 GWHAAZE00000008 - View
Lonicera japonica Lj1A881T81 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_5_2601 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI16_g42268_MAGBIO AED:0.04 Chr16 + View
Malus domestica MD03G1193000 RING/FYVE/PHD zinc finger superfamily protein Chr03 + View
Malus domestica MD11G1209200 RING/FYVE/PHD zinc finger superfamily protein Chr11 + View
Manihot esculenta Manes.15G066000 Chromosome15 + View
Medicago truncatula Medtr5g093940 PHD-finger protein chr5 - View
Nelumbo nucifera Nn1g03330 chr1 + View
Nicotiana tabacum Nitab4.5_0001160g0060 Bromo adjacent homology (BAH) domain, Zinc finger, PHD-finger, Zinc finger, PHD-type, Zinc finger, FYVE/PHD-type, Zinc finger, PHD-type, conserved site, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001160 - View
Olea europaea Oeu005515.1 chr10 - View
Olea europaea Oeu007995.1 chr21 - View
Olea europaea Oeu005986.1 scaffold1216 + View
Petunia axillaris Peaxi162Scf00339g01131 RING/FYVE/PHD zinc finger superfamily protein Peaxi162Scf00339 - View
Petunia axillaris Peaxi162Scf00235g00827 RING/FYVE/PHD zinc finger superfamily protein Peaxi162Scf00235 - View
Punica granatum PGR031G2569 NC_045127.1 - View
Prunus persica Prupe.4G224000 Pp04 - View
Pisum sativum Psat2g010080 PHD-finger chr2LG1 + View
Papaver somniferum PSO302G0213 NW_020624820.1 + View
Papaver somniferum PSO210G5678 NC_039359.1 + View
Populus trichocarpa Potri.001G358900 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.008G272900 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr08 - View
Quercus lobata QL08p007634 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0041571 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0016300 chr04 + View
Striga asiatica SGA_v2.0_scaffold168G38508 scaffold168 - View
Salix brachista Sabra16G0236700 GWHAAZH00000016 + View
Simmondsia chinensis Sc16g0005710 GWHAASQ00000016 + View
Sechium edule Sed0002209 LG08 - View
Sapria himalayana SHI26565 scaffold60_3140063 + View
Schrenkiella parvula Sp1g37440 PTHR22880//PTHR22880:SF171 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // SUBFAMILY NOT NAMED ch1-2 + View
Solanum pennellii Sopen07g033210 RING/FYVE/PHD zinc finger superfamily protein | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein Spenn-ch07 - View
Solanum pennellii Sopen12g007410 RING/FYVE/PHD zinc finger superfamily protein | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein Spenn-ch12 - View
Solanum tuberosum PGSC0003DMG402022202 PHD finger family protein ST4.03ch07 - View
Solanum tuberosum PGSC0003DMG400012847 PHD finger family protein ST4.03ch12 - View
Selenicereus undatus Hund01951 Scaffold_33678 + View
Trochodendron aralioides TAR626G0993 group3 + View
Trochodendron aralioides TAR629G3495 group0 + View
Theobroma cacao Thecc.07G027600 RING/FYVE/PHD zinc finger superfamily protein Chromosome_7 + View
Trifolium pratense TPR.G30656 Tp57577_TGAC_v2_scaf_496 + View
Tripterygium wilfordii TWI39G0230 NC_052250.1 - View
Tripterygium wilfordii TWI38G1745 NC_052252.1 - View
Vaccinium macrocarpon vmacro09687 Similar to At3g20280: PHD finger protein At3g20280 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0514 CM024073.1 - View
Vitis vinifera GSVIVG01037731001 chr19 - View