Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc03g118540.4 Jasmonate ZIM domain protein e (AHRD V3.3 *-* I3WTA3_NICAT) SL4.0ch03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL3G31030 scaffold_3 + View
Arabidopsis thaliana AT1G48500 jasmonate-zim-domain protein 4 jasmonate-zim-domain protein 4 (JAZ4)%3B CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399)%2C CCT domain-like (InterPro:IPR018467)%3B BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 3 (TAIR:AT3G17860.1)%3B Has 328 Blast hits to 328 proteins in 29 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 1%3B Plants - 326%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). jasmonate-zim-domain protein 4 (JAZ4)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399)%2C CCT domain-like (InterPro:IPR018467)%3B BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 3 (TAIR:AT3G17860.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G17860 jasmonate-zim-domain protein 3 JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore%2C JAI3 negatively regulates the key transcriptional activator of JA responses%2C AtMYC2. The C-terminal portion of JAZ3%2C including the Jas domain%2C appears to be important for JAZ3-COI1 binding in the presence of coronatine. jasmonate-zim-domain protein 3 (JAZ3)%3B CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399)%2C CCT domain-like (InterPro:IPR018467)%3B BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1)%3B Has 657 Blast hits to 387 proteins in 36 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 365%3B Viruses - 0%3B Other Eukaryotes - 290 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g28742 ChrC05 - View
Brassica carinata BcaB06g25850 ChrB06 + View
Brassica napus A01p36510 A01 - View
Brassica napus A05p31930 A05 - View
Brassica oleracea BolC5t33579H C5 - View
Brassica rapa BraA01t03714Z A01 - View
Brassica rapa BraA05t22024Z A05 - View
Capsicum annuum CAN.G843.41 PGAv.1.6.scaffold843 + View
Capsicum annuum CAN.G423.35 PGAv.1.6.scaffold423 - View
Coffea canephora Cc04_g06060 Putative Protein TIFY 6B chr4 + View
Cardamine hirsuta CARHR093210 Protein TIFY 6B Chr3 + View
Carya illinoinensis CiPaw.15G144900 K13464 - jasmonate ZIM domain-containing protein (JAZ) Chr15 - View
Capsella rubella Carub.0001s3762 PTHR33077//PTHR33077:SF7 - FAMILY NOT NAMED // PROTEIN TIFY 6A-RELATED scaffold_1 + View
Capsella rubella Carub.0003s1757 PTHR33077//PTHR33077:SF7 - FAMILY NOT NAMED // PROTEIN TIFY 6A-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_1G007260 protein TIFY 6B-like isoform X2 chr1 - View
Eucalyptus grandis Eucgr.K02279 Chr11 - View
Fragaria x ananassa FAN04G1846 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Fvb5-4 - View
Fragaria x ananassa FAN18G3599 K13464 - jasmonate ZIM domain-containing protein (JAZ) Fvb5-1 - View
Lupinus albus Lalb_Chr05g0222291 PTHR33077//PTHR33077:SF7 - FAMILY NOT NAMED // PROTEIN TIFY 6A-RELATED Lalb_Chr05 + View
Lupinus albus Lalb_Chr05g0221571 PF06200 - tify domain (tify) Lalb_Chr05 + View
Lotus japonicus Lj4g0025032 PTHR33077:SF7 - PROTEIN TIFY 6A-RELATED chr4 + View
Manihot esculenta Manes.14G172400 Chromosome14 - View
Nicotiana tabacum Nitab4.5_0002046g0020 Tify, CO/COL/TOC1, conserved site Nitab4.5_0002046 - View
Olea europaea Oeu046627.1 chr2 - View
Olea europaea Oeu015090.1 chr17 - View
Petunia axillaris Peaxi162Scf00207g00008 jasmonate-zim-domain protein 3 Peaxi162Scf00207 - View
Petunia axillaris Peaxi162Scf00314g00330 jasmonate-zim-domain protein 3 Peaxi162Scf00314 - View
Punica granatum PGR083G1816 NC_045133.1 - View
Papaver somniferum PSO478G3203 NC_039361.1 + View
Phaseolus vulgaris Phvul.002G319600 Chr02 - View
Phaseolus vulgaris Phvul.004G149500 K13464 - jasmonate ZIM domain-containing protein (JAZ) Chr04 + View
Salix brachista Sabra15G0029500 GWHAAZH00000015 + View
Sechium edule Sed0027139 LG01 - View
Schrenkiella parvula Sp3g15990 PTHR33077:SF7 - PROTEIN TIFY 6A-RELATED ch3-1 + View
Solanum pennellii Sopen06g026220 JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine. | jasmonate-zim-domain protein 3 (JAZ3) | FUNCTIONS IN: protein binding | INVOLVED IN: jasmonic acid mediated signaling pathway | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tify , CCT domain-like | BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400014187 Conserved gene of unknown function ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400028800 Gene of unknown function ST4.03ch06 + View
Tarenaya hassleriana THA.LOC104820340 protein TIFY 6B isoform X1 NW_010966178.1 + View
Tripterygium wilfordii TWI15G0998 NC_052247.1 - View
Tripterygium wilfordii TWI81G1041 NC_052251.1 + View