Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc12g009620.2 Ubiquitin system component Cue protein (AHRD V3.3 *** F4KED5_ARATH) SL4.0ch12 + View
Solyc07g007960.3 Ubiquitin system component Cue protein (AHRD V3.3 *** Q8H1Q3_ARATH) SL4.0ch07 - View
Solyc03g116780.3 Ubiquitin system component Cue (AHRD V3.3 *** A0A200QTD9_9MAGN) SL4.0ch03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G320 LG-4 - View
Acer truncatum Atru.chr1.2903 chr1 + View
Actinidia chinensis Actinidia26373 Lachesis_group25 - View
Actinidia chinensis Actinidia40494 Lachesis_group10 - View
Actinidia chinensis Actinidia15978 Lachesis_group9 + View
Actinidia chinensis Actinidia01738 Lachesis_group1 + View
Actinidia chinensis Actinidia15755 Lachesis_group27 - View
Actinidia chinensis Actinidia08794 Lachesis_group2 + View
Arabidopsis lyrata AL2G41500 scaffold_2 + View
Avicennia marina MSTRG.11147 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.4703 ScioBoG_102837_HRSCAF_103074 - View
Avicennia marina MSTRG.22752 ScioBoG_3703_HRSCAF_3719 + View
Amaranthus hybridus Ah.01g006580 AmaHy_arrow1_Scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QMVE3T PF02845 - CUE domain (CUE) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NKR70F PF02845 - CUE domain (CUE) arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VD9BGC arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7YRF18 PF02845 - CUE domain (CUE) arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT1G80040 ubiquitin system component Cue FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB02g07298 ChrB02 + View
Brassica carinata BcaC03g16008 ChrC03 + View
Brassica carinata BcaB05g25299 ChrB05 + View
Brassica carinata BcaC08g45287 ChrC08 - View
Brassica carinata BcaC08g47567 ChrC08 - View
Brassica napus A02p23840 A02 + View
Brassica napus A07p26480 A07 - View
Brassica oleracea BolC6t38056H C6 - View
Brassica oleracea BolC2t09778H C2 + View
Beta vulgaris EL10Ac9g21878 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0048410 PREDICTED: uncharacterized protein LOC105164821 isoform X2 [Sesamum indicum] Chr15 + View
Capsicum annuum CAN.G407.76 PGAv.1.6.scaffold407 - View
Capsicum annuum CAN.G1503.10 PGAv.1.6.scaffold1503 + View
Cannabis sativa CANSAT56G2963 NC_044371.1 + View
Corylus avellana Haze_16569 Protein of unknown function 11 + View
Coffea canephora Cc04_g04470 Ubiquitin system component Cue protein chr4 + View
Coffea canephora Cc06_g08120 Ubiquitin system component Cue protein chr6 - View
Citrus clementina Ciclev10026298m.g scaffold_7 + View
Cardamine hirsuta CARHR074440 Ubiquitin system component Cue protein Chr2 + View
Carya illinoinensis CiPaw.02G157700 PF02845 - CUE domain (CUE) Chr02 + View
Carya illinoinensis CiPaw.01G248900 PF02845 - CUE domain (CUE) Chr01 + View
Carya illinoinensis CiPaw.04G174600 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Chr04 + View
Citrullus lanatus ClCG07G012180 CUE domain containing protein CG_Chr07 + View
Citrullus lanatus ClCG11G003300 CUE domain containing protein CG_Chr11 + View
Chenopodium quinoa AUR62011511 Protein of unknown function C_Quinoa_Scaffold_3333 - View
Chenopodium quinoa AUR62016330 Protein of unknown function C_Quinoa_Scaffold_3514 - View
Capsella rubella Carub.0002s2748 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN scaffold_2 + View
Cucumis sativus L. CsaV3_2G003120 Ubiquitin system component Cue chr2 + View
Cucumis sativus L. CsaV3_4G001980 Ubiquitin system component Cue chr4 - View
Daucus carota DCAR_016271 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_009321 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_021350 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv30614 GWHABJS00000019 - View
Davidia involucrata Dinv38127 GWHABJS00000006 - View
Davidia involucrata Dinv36483 GWHABJS00000001 - View
Durio zibethinus Duzib235G1279 NW_019167982.1 - View
Durio zibethinus Duzib168G0489 NW_019168159.1 - View
Durio zibethinus Duzib160G0273 NW_019168015.1 - View
Durio zibethinus Duzib187G0967 NW_019167860.1 - View
Erigeron canadensis ECA232G2693 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA234G4832 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.F03883 Chr06 + View
Eucalyptus grandis Eucgr.C04262 Chr03 + View
Erythranthe guttata Migut.D01082 scaffold_4 + View
Erythranthe guttata Migut.I00755 scaffold_9 - View
Eutrema salsugineum Thhalv10019034m.g PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN scaffold_9 - View
Fragaria x ananassa FAN05G5043 PF02845 - CUE domain (CUE) Fvb6-3 + View
Fragaria x ananassa FAN14G0412 PF02845 - CUE domain (CUE) Fvb6-1 + View
Fragaria x ananassa FAN09G4546 PF02845 - CUE domain (CUE) Fvb6-2 + View
Fragaria x ananassa FAN02G3023 PF02845 - CUE domain (CUE) Fvb6-4 - View
Fragaria vesca FvH4_6g29540 PF02845 - CUE domain (CUE) Fvb6 - View
Gossypium hirsutum Gohir.A06G184700 A06 - View
Gossypium hirsutum Gohir.D06G191700 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN D06 - View
Gossypium hirsutum Gohir.A05G014500 PF03474 - DMRTA motif (DMA) A05 - View
Gossypium hirsutum Gohir.D05G015600 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN D05 - View
Gossypium hirsutum Gohir.A06G117100 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN A06 - View
Glycine max Glyma.15G007000 PF02845 - CUE domain (CUE) Gm15 - View
Glycine max Glyma.07G029500 PF02845 - CUE domain (CUE) Gm07 - View
Glycine max Glyma.08G213300 PF02845 - CUE domain (CUE) Gm08 + View
Glycine max Glyma.13G366200 PF02845 - CUE domain (CUE) Gm13 + View
Gossypium raimondii Gorai.009G015700 Chr09 - View
Gossypium raimondii Gorai.010G224900 Chr10 - View
Lupinus albus Lalb_Chr01g0012331 PF02845 - CUE domain (CUE) Lalb_Chr01 - View
Lupinus albus Lalb_Chr25g0279261 Lalb_Chr25 - View
Lupinus albus Lalb_Chr12g0198141 Lalb_Chr12 + View
Lupinus albus Lalb_Chr04g0262361 Lalb_Chr04 - View
Lupinus albus Lalb_Chr14g0373861 PF02845 - CUE domain (CUE) Lalb_Chr14 + View
Lotus japonicus Lj3g0018784 PF02845 - CUE domain (CUE) chr3 + View
Lotus japonicus Lj4g0018642 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN chr4 - View
Lotus japonicus Lj3g0012489 PF02845 - CUE domain (CUE) chr3 + View
Lonicera japonica Lj5A74G66 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_87681 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_5_131461 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Lsat_1_v8_lg_5 - View
Malus domestica MD17G1213400 Ubiquitin system component Cue protein Chr17 + View
Malus domestica MD02G1026900 Ubiquitin system component Cue protein Chr02 - View
Manihot esculenta Manes.11G057900 Chromosome11 + View
Manihot esculenta Manes.14G115900 Chromosome14 - View
Manihot esculenta Manes.06G047900 Chromosome06 - View
Medicago truncatula Medtr2g104010 ubiquitin system component CUE protein chr2 + View
Medicago truncatula Medtr4g010100 ubiquitin system component CUE protein chr4 - View
Nicotiana tabacum Nitab4.5_0000373g0070 Ubiquitin system component Cue, UBA-like Nitab4.5_0000373 + View
Olea europaea Oeu060113.1 scaffold830 - View
Petunia axillaris Peaxi162Scf00207g00632 Ubiquitin system component Cue protein Peaxi162Scf00207 - View
Petunia axillaris Peaxi162Scf00332g00633 Ubiquitin system component Cue protein Peaxi162Scf00332 - View
Punica granatum PGR142G3451 NC_045128.1 - View
Punica granatum PGR102G2558 NC_045129.1 - View
Prunus persica Prupe.3G088700 PF02845 - CUE domain (CUE) Pp03 + View
Pisum sativum Psat7g257240 CUE domain chr7LG7 + View
Populus trichocarpa Potri.018G127200 PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Chr18 - View
Phaseolus vulgaris Phvul.010G156600 PF02845 - CUE domain (CUE) Chr10 + View
Phaseolus vulgaris Phvul.005G178700 PF02845 - CUE domain (CUE) Chr05 + View
Rosa chinensis RcHm_v2.0_Chr2g0135081 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim12G0190800 chr12 - View
Rhododendron simsii Rhsim08G0212300 chr08 - View
Striga asiatica SGA_v2.0_scaffold5G02706 scaffold5 + View
Salvia bowleyana SalBow6G3520 GWHASIU00000002 + View
Salvia bowleyana SalBow6G6042 GWHASIU00000002 - View
Salvia bowleyana SalBow2G0910 GWHASIU00000007 - View
Salix brachista Sabra06G0048700 GWHAAZH00000006 - View
Salix brachista Sabra18G0107900 GWHAAZH00000018 - View
Simmondsia chinensis Sc18g0000390 GWHAASQ00000018 - View
Sechium edule Sed0021041 LG05 - View
Sechium edule Sed0020886 LG06 - View
Sechium edule Sed0025644 LG11 + View
Schrenkiella parvula Sp5g35810 PTHR31245//PTHR31245:SF1 - FAMILY NOT NAMED // UBIQUITIN SYSTEM COMPONENT CUE PROTEIN ch5-7 - View
Solanum pennellii Sopen06g025460 hypothetical protein Spenn-ch06 + View
Solanum pennellii Sopen03g035700 Ubiquitin system component Cue protein | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue | BEST Arabidopsis thaliana protein match is: unknown protein . Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG402028532 Conserved gene of unknown function ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400000623 Conserved gene of unknown function ST4.03ch03 + View
Selenicereus undatus Hund09279 Scaffold_33676 + View
Trochodendron aralioides TAR626G0058 group3 + View
Tarenaya hassleriana THA.LOC104808967 uncharacterized protein LOC104808967 NW_010964923.1 - View
Trifolium pratense TPR.G37220 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G38675 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI75G0429 NC_052253.1 + View
Tripterygium wilfordii TWI12G0808 NC_052243.1 - View
Tripterygium wilfordii TWI63G0119 NC_052240.1 + View
Utricularia gibba unitig_52.g17460 unitig_52 + View
Vaccinium macrocarpon vmacro06153 Protein of unknown function chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16890 Protein of unknown function chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro19005 Protein of unknown function chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G0897 CM024078.1 - View
Vigna mungo VMungo1215G3452 CM024074.1 + View
Vitis vinifera GSVIVG01017350001 chr9 + View