Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc06g062500.4 60S ribosomal protein L28 (AHRD V3.3 *** B3TLS3_ELAGV) SL4.0ch06 + View
Solyc12g044720.2 60S ribosomal protein L28 (AHRD V3.3 *** B3TLS3_ELAGV) SL4.0ch12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.1521 chr7 + View
Acer truncatum Atru.chr1.3626 chr1 - View
Actinidia chinensis Actinidia09018 Lachesis_group2 + View
Actinidia chinensis Actinidia39747 Lachesis_group5 - View
Avicennia marina MSTRG.22607 ScioBoG_3703_HRSCAF_3719 - View
Avicennia marina MSTRG.4760 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.11006 ScioBoG_14204_HRSCAF_14270 - View
Aquilegia oxysepala Aqoxy7G01309 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D10BJJ K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SZ1DHP K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VH4DX9 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.90BG8T K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT4G29410 Ribosomal L28e protein family Ribosomal L28e protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3)%3B Has 531 Blast hits to 531 proteins in 207 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 284%3B Fungi - 94%3B Plants - 107%3B Viruses - 0%3B Other Eukaryotes - 46 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0789G113 AmTr_v1.0_scaffold00036 - View
Brassica rapa BraA07t27902Z A07 - View
Beta vulgaris EL10Ac9g21134 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0041966 PREDICTED: 60S ribosomal protein L28-2-like [Nelumbo nucifera] Chr15 + View
Capsicum annuum CAN.G1668.5 PGAv.1.6.scaffold1668 + View
Capsicum annuum CAN.G635.28 PGAv.1.6.scaffold635 - View
Cannabis sativa CANSAT56G0099 NC_044371.1 - View
Cicer arietinum L. Ca_01182_v3 Ca_LG1_v3 - View
Corylus avellana Haze_15916 Similar to RPL28C: 60S ribosomal protein L28-2 (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_25871 Similar to RPL28C: 60S ribosomal protein L28-2 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc04_g02250 60S ribosomal protein L28-1 chr4 - View
Citrus clementina Ciclev10009798m.g scaffold_1 + View
Citrus clementina Ciclev10027521m.g scaffold_7 - View
Carpinus fangiana Cfa003609 Cfa01 + View
Carya illinoinensis CiPaw.02G142300 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Chr02 + View
Citrullus lanatus ClCG11G001860 60S ribosomal protein L28, putative CG_Chr11 + View
Citrullus lanatus ClCG07G013610 60S ribosomal protein L28, putative CG_Chr07 + View
Cucumis melo MELO3C013029.2 60S ribosomal protein L28, putative chr04 - View
Cucumis melo MELO3C004617.2 60S ribosomal protein L28, putative chr05 - View
Carica papaya Cpa.g.sc131.27 supercontig_131 - View
Chenopodium quinoa AUR62023907 RPL28A: 60S ribosomal protein L28-1 C_Quinoa_Scaffold_3389 - View
Cucumis sativus L. CsaV3_3G044020 60S ribosomal protein L28, putative chr3 - View
Daucus carota DCAR_007607 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_026372 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv37936 GWHABJS00000006 - View
Davidia involucrata Dinv30402 GWHABJS00000019 - View
Durio zibethinus Duzib235G0971 NW_019167982.1 - View
Durio zibethinus Duzib192G0237 NW_019168037.1 + View
Durio zibethinus Duzib160G0391 NW_019168015.1 - View
Erigeron canadensis ECA232G3199 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.F03101 Chr06 - View
Eucalyptus grandis Eucgr.J02888 Chr10 + View
Erythranthe guttata Migut.I00997 scaffold_9 + View
Erythranthe guttata Migut.D00979 scaffold_4 - View
Fragaria x ananassa FAN09G3471 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Fvb6-2 + View
Fragaria x ananassa FAN19G0103 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Fvb1-4 - View
Fragaria x ananassa FAN02G1547 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Fvb6-4 - View
Fragaria x ananassa FAN28G2678 PTHR10544//PTHR10544:SF1 - 60S RIBOSOMAL PROTEIN L28 // SUBFAMILY NOT NAMED Fvb1-1 + View
Fragaria vesca FvH4_1g06820 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Fvb1 - View
Fragaria vesca FvH4_6g32910 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Fvb6 - View
Gossypium hirsutum Gohir.D10G064000 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) D10 + View
Gossypium hirsutum Gohir.D06G198700 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) D06 - View
Gossypium hirsutum Gohir.D06G069200 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) D06 - View
Gossypium hirsutum Gohir.A05G133500 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) A05 - View
Gossypium hirsutum Gohir.A06G070600 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) A06 - View
Gossypium hirsutum Gohir.A06G190300 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) A06 - View
Gossypium hirsutum Gohir.A10G062300 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) A10 + View
Glycine max Glyma.15G022700 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Gm15 - View
Glycine max Glyma.13G352100 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Gm13 + View
Gossypium raimondii Gorai.011G067900 Chr11 + View
Gossypium raimondii Gorai.010G080800 Chr10 - View
Gossypium raimondii Gorai.009G139200 Chr09 - View
Helianthus annuus HanXRQChr12g0360691 Putative ribosomal protein L28e; Ribosomal L28e/Mak16 HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0388F.1_g142140 Hma1.2p1_0388F.1 - View
Lupinus albus Lalb_Chr25g0280551 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Lalb_Chr25 + View
Lupinus albus Lalb_Chr22g0351681 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Lalb_Chr22 - View
Lupinus albus Lalb_Chr04g0263131 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Lalb_Chr04 + View
Lotus japonicus Lj3g0002585 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) chr3 + View
Lotus japonicus Lj3g0026331 PTHR10544//PTHR10544:SF1 - 60S RIBOSOMAL PROTEIN L28 // SUBFAMILY NOT NAMED chr3 - View
Lactuca sativa Lsat_1_v5_gn_4_96020 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_5_134080 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI04_g06217_MAGBIO AED:0.21 Chr04 + View
Magnolia biondii MBI01_g27632_MAGBIO AED:0.04 Chr01 + View
Malus domestica MD15G1202600 Ribosomal L28e protein family Chr15 - View
Malus domestica MD09G1196500 Ribosomal L28e protein family Chr09 + View
Malus domestica MD02G1072800 Ribosomal L28e protein family Chr02 - View
Manihot esculenta Manes.11G029000 Chromosome11 + View
Manihot esculenta Manes.04G137300 Chromosome04 - View
Medicago truncatula Medtr2g100410 60S ribosomal L28-like protein chr2 + View
Medicago truncatula Medtr8g015570 60S ribosomal L28-like protein chr8 - View
Nelumbo nucifera Nn6g35404 chr6 - View
Nicotiana tabacum Nitab4.5_0000300g0080 Ribosomal protein L28e Nitab4.5_0000300 - View
Nicotiana tabacum Nitab4.5_0006071g0060 Ribosomal protein L28e Nitab4.5_0006071 - View
Nicotiana tabacum Nitab4.5_0004848g0090 Ribosomal protein L28e Nitab4.5_0004848 - View
Olea europaea Oeu002521.1 chr12 + View
Olea europaea Oeu052816.1 chr18 - View
Petunia axillaris Peaxi162Scf00207g01137 Ribosomal L28e protein family Peaxi162Scf00207 - View
Petunia axillaris Peaxi162Scf00038g01242 Ribosomal L28e protein family Peaxi162Scf00038 + View
Punica granatum PGR102G0724 NC_045129.1 + View
Prunus persica Prupe.7G214600 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Pp07 + View
Prunus persica Prupe.3G052900 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Pp03 + View
Pisum sativum Psat5g294280 Ribosomal L28e protein family chr5LG3 + View
Pisum sativum Psat4g194560 Ribosomal L28e protein family chr4LG4 + View
Populus trichocarpa Potri.003G045500 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Chr03 - View
Phaseolus vulgaris Phvul.005G161300 K02903 - large subunit ribosomal protein L28e (RP-L28e, RPL28) Chr05 + View
Quercus lobata QL05p015769 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0092591 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr2g0142381 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim12G0204600 chr12 - View
Rhododendron simsii Rhsim08G0230900 chr08 - View
Striga asiatica SGA_v2.0_scaffold68G22936 scaffold68 - View
Striga asiatica SGA_v2.0_scaffold71G23754 scaffold71 - View
Salvia bowleyana SalBow6G3009 GWHASIU00000002 + View
Simmondsia chinensis Sc12g0009920 GWHAASQ00000012 + View
Sechium edule Sed0025872 LG06 + View
Sechium edule Sed0016574 LG06 - View
Solanum pennellii Sopen03g040140 Ribosomal L28e protein family | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, ribosome biogenesis | LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e | BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family Spenn-ch03 + View
Solanum pennellii Sopen06g021980 Ribosomal L28e protein family | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, ribosome biogenesis | LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e | BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family Spenn-ch06 + View
Solanum pennellii Sopen12g022910 Ribosomal L28e protein family | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, ribosome biogenesis | LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e | BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family Spenn-ch12 - View
Solanum tuberosum PGSC0003DMG400006491 Ribosomal protein L28 ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400004838 Ribosomal protein L28 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400002597 Ribosomal protein L28 ST4.03ch03 + View
Selenicereus undatus Hund07661 Scaffold_33676 - View
Trochodendron aralioides TAR626G1326 group3 + View
Trochodendron aralioides TAR624G0738 group9 + View
Theobroma cacao Thecc.06G107400 Ribosomal L28e protein family Chromosome_6 - View
Theobroma cacao Thecc.09G094200 Ribosomal L28e protein family Chromosome_9 + View
Tripterygium wilfordii TWI32G1202 NC_052254.1 - View
Tripterygium wilfordii TWI34G1429 NC_052235.1 + View
Vaccinium macrocarpon vmacro18824 Similar to RPL28C: 60S ribosomal protein L28-2 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16996 Similar to RPL28C: 60S ribosomal protein L28-2 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1175 CM024078.1 + View
Vigna mungo VMungo1080G0973 CM024079.1 - View
Vitis vinifera GSVIVG01035350001 chr4 - View