Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc02g094290.1 TCP transcription factor 27 SL4.0ch02 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G5580 LG-2 + View
Acer truncatum Atru.chr6.2597 chr6 + View
Actinidia chinensis Actinidia36216 Lachesis_group4 - View
Actinidia chinensis Actinidia05888 Lachesis_group11 - View
Arabidopsis lyrata AL7G48520 scaffold_7 - View
Arabidopsis lyrata AL5G16030 scaffold_5 - View
Avicennia marina MSTRG.479 ScioBoG_102831_HRSCAF_103044 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KNN8RN PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G27010 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1%3B1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain family protein 20 (TCP20)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1)%3B Has 543 Blast hits to 539 proteins in 120 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 2%3B Fungi - 0%3B Plants - 525%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G41030 TCP family transcription factor TCP family transcription factor %3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain family protein 20 (TAIR:AT3G27010.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g33868 ChrC06 + View
Brassica carinata BcaB04g19423 ChrB04 - View
Brassica napus C09p03440 C09 - View
Brassica napus A02p34980 A02 - View
Brassica napus A09p03240 A09 - View
Brassica napus A04p14070 A04 + View
Brassica oleracea BolC9t53265H C9 - View
Brassica oleracea BolC7t44125H C7 - View
Brassica rapa BraA09t35962Z A09 - View
Brassica rapa BraA02t08506Z A02 - View
Brassica rapa BraA04t17068Z A04 + View
Beta vulgaris EL10Ac6g15439 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0049039 transcription factor, putative [Ricinus communis] Chr2 - View
Camellia sinensis var. sinensis CSS0002855 hypothetical protein PHAVU_001G089100g [Phaseolus vulgaris] Chr1 - View
Capsicum annuum CAN.G473.122 PGAv.1.6.scaffold473 + View
Capsicum annuum CAN.G1525.3 PGAv.1.6.scaffold1525 - View
Cannabis sativa CANSAT64G1794 NC_044379.1 - View
Coffea canephora Cc07_g01000 Transcription factor TCP20 chr7 + View
Citrus clementina Ciclev10015977m.g scaffold_2 - View
Carpinus fangiana Cfa007207 Cfa03 - View
Cardamine hirsuta CARHR148200 TCP transcription factor 18 Chr5 - View
Cardamine hirsuta CARHR213340 TCP family transcription factor Chr7 - View
Carya illinoinensis CiPaw.04G039400 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Chr04 + View
Carya illinoinensis CiPaw.03G058100 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr03 + View
Citrullus lanatus ClCG05G013720 TCP family transcription factor family protein CG_Chr05 + View
Capsella rubella Carub.0007s3446 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED scaffold_7 - View
Capsella rubella Carub.0005s0520 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_3G026870 transcription factor TCP20 chr3 - View
Davidia involucrata Dinv33322 GWHABJS00000014 - View
Davidia involucrata Dinv25646 GWHABJS00000012 + View
Durio zibethinus Duzib187G1441 NW_019167860.1 - View
Durio zibethinus Duzib147G0245 NW_019168470.1 + View
Durio zibethinus Duzib264G0804 NW_019167960.1 - View
Erigeron canadensis ECA238G1950 Conyza_canadensis_scaffold:6 + View
Erythranthe guttata Migut.F00047 scaffold_6 - View
Eutrema salsugineum Thhalv10004391m.g PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10028073m.g PTHR31072:SF7 - TRANSCRIPTION FACTOR TCP21-RELATED scaffold_14 - View
Fragaria x ananassa FAN02G1392 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6-4 + View
Fragaria vesca FvH4_6g53830 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D04G075200 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED D04 - View
Gossypium hirsutum Gohir.D09G038300 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED D09 + View
Glycine max Glyma.19G095300 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Gm19 + View
Gossypium raimondii Gorai.001G273300 Chr01 + View
Gossypium raimondii Gorai.006G043800 Chr06 + View
Gossypium raimondii Gorai.012G084600 Chr12 - View
Helianthus annuus HanXRQChr09g0256441 Probable TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 HanXRQChr09 + View
Lupinus albus Lalb_Chr22g0360271 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Lalb_Chr22 + View
Lotus japonicus Lj1g0021676 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED chr1 - View
Lonicera japonica Lj7P611T37 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_2_94320 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Lsat_1_v8_lg_2 + View
Prunus persica Prupe.3G308700 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED Pp03 + View
Populus trichocarpa Potri.001G327100 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED Chr01 - View
Quercus lobata QL02p070859 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0175971 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0004700 chr10 - View
Salix brachista Sabra16G0209500 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0006340 GWHAASQ00000003 - View
Sechium edule Sed0020156 LG08 + View
Sechium edule Sed0024351 LG06 - View
Schrenkiella parvula Sp7g00880 PTHR31072//PTHR31072:SF4 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP20-RELATED ch7-1 - View
Schrenkiella parvula Sp2g16130 PTHR31072:SF4 - TRANSCRIPTION FACTOR TCP20-RELATED ch2-4 - View
Solanum pennellii Sopen02g038930 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1, 1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (TCP20) | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TCP family transcription factor Spenn-ch02 + View
Solanum pennellii Sopen02g017300 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1, 1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (TCP20) | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TCP family transcription factor Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400040232 Transcription factor ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400020247 Transcription factor ST4.03ch02 + View
Trochodendron aralioides TAR374G0904 group12 + View
Trochodendron aralioides TAR629G0902 group0 - View
Theobroma cacao Thecc.04G040300 Teosinte branched 1 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104805322 transcription factor TCP20-like NW_010961290.1 - View
Tripterygium wilfordii TWI18G0336 NC_052241.1 + View
Utricularia gibba unitig_0.g1937 unitig_0 - View
Vaccinium macrocarpon vmacro18359 Similar to TCP20: Transcription factor TCP20 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View