Gene: AT3G27010
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G27010
- Transcript Identifier AT3G27010.1
- Gene Type Coding gene
- Location Chr3 : 9957810-9958754 : negative
Gene Family Information
- ID HOM05D000350
- #Genes/#Species 1350/95
- Phylogenetic origin
- ID ORTHO05D000228
- #Genes/#Species 1338/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G27010.1
- symbol TCP20
- Alias AT-TCP20,ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20,ATTCP20,PCF1
- full_name TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain family protein 20
- uniprot Q9LSD5
Descriptions
- Description TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20
- Computational description TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (TCP20); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT5G41030.1); Has 543 Blast hits to 539 proteins in 120 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000024 | ISO | PLAZA Integrative Orthology | regulation of leaf development | Solyc02g068200.1 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:1900056 | IGI | Gene Ontology | negative regulation of leaf senescence | 1 |
| GO:0008361 | IGI | Gene Ontology | regulation of cell size | 1 |
| GO:0009653 | TAS | Gene Ontology | anatomical structure morphogenesis | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 3 |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IDA ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 2 4 5 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IPI | Gene Ontology | DNA binding | 6 |
| GO:0043565 | IPI IBA | Gene Ontology | sequence-specific DNA binding | 1 5 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0000987 | IDA | Gene Ontology | cis-regulatory region sequence-specific DNA binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |