Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc02g088070.3 Dof zinc finger protein (AHRD V3.3 *** A0A2K3PAB0_TRIPR) SL4.0ch02 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11210 LG-4 + View
Aethionema arabicum Aa31LG9G16450 LG-9 - View
Acer truncatum Atru.chr11.1769 chr11 - View
Acer truncatum Atru.chr8.186 chr8 + View
Actinidia chinensis Actinidia35003 Lachesis_group2 + View
Actinidia chinensis Actinidia37623 Lachesis_group13 - View
Actinidia chinensis Actinidia31903 Lachesis_group15 - View
Actinidia chinensis Actinidia04884 Lachesis_group1 + View
Actinidia chinensis Actinidia19037 Lachesis_group9 + View
Actinidia chinensis Actinidia38770 Lachesis_group4 + View
Arabidopsis lyrata AL7G50650 scaffold_7 - View
Arabidopsis lyrata AL2G28710 scaffold_2 - View
Avicennia marina MSTRG.23929 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.708 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.3331 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.4433 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.03g134930 Cyclic dof factor 1 (Dof zinc finger protein DOF5.5) (AtDOF5.5) AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.02S8F1 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q28BRX PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT5G39660 cycling DOF factor 2 Dof-type zinc finger domain-containing protein%2C identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1%2C but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2 (CDF2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 1150 Blast hits to 1134 proteins in 76 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 18%3B Fungi - 6%3B Plants - 1095%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink). cycling DOF factor 2 (CDF2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G69570 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G26790.1)%3B Has 1305 Blast hits to 1151 proteins in 75 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 16%3B Fungi - 10%3B Plants - 1107%3B Viruses - 0%3B Other Eukaryotes - 166 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G26790 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: stem%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G69570.1)%3B Has 1165 Blast hits to 1142 proteins in 80 species: Archae - 0%3B Bacteria - 20%3B Metazoa - 7%3B Fungi - 8%3B Plants - 1093%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0564G304 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaC08g46398 ChrC08 - View
Brassica carinata BcaB03g14726 ChrB03 - View
Brassica napus A07p31550 A07 + View
Brassica napus A04p12380 A04 + View
Brassica napus A07p35930 A07 - View
Brassica napus C06p43300 C06 - View
Brassica oleracea BolC6t39405H C6 - View
Brassica rapa BraA04t16901Z A04 + View
Brassica rapa BraA07t31176Z A07 - View
Brassica rapa BraA07t30784Z A07 + View
Beta vulgaris EL10Ac2g02993 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0026500 PREDICTED: cyclic dof factor 2 [Vitis vinifera] Chr2 + View
Camellia sinensis var. sinensis CSS0017752 PREDICTED: cyclic dof factor 2 [Vitis vinifera] Chr12 - View
Camellia sinensis var. sinensis CSS0027296 Dof zinc finger protein [Morus notabilis] Chr6 + View
Capsicum annuum CAN.G206.160 PGAv.1.6.scaffold206 + View
Cannabis sativa CANSAT64G2040 NC_044379.1 + View
Cicer arietinum L. Ca_04287_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_21816_v3 Ca_LG7_v3 - View
Corylus avellana Haze_07317 Similar to CDF3: Cyclic dof factor 3 (Arabidopsis thaliana OX%3D3702) 4 - View
Corylus avellana Haze_11999 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_14515 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g03470 Putative Dof zinc finger protein DOF5.2 chr7 + View
Citrus clementina Ciclev10011556m.g scaffold_6 + View
Citrus clementina Ciclev10031433m.g scaffold_4 + View
Carpinus fangiana Cfa007571 Cfa03 + View
Cardamine hirsuta CARHR025150 Dof zinc finger protein Chr1 + View
Cardamine hirsuta CARHR062520 Dof zinc finger protein Chr2 - View
Carya illinoinensis CiPaw.04G016400 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr04 - View
Carya illinoinensis CiPaw.03G025400 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Chr03 - View
Carya illinoinensis CiPaw.05G133500 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Chr05 - View
Citrullus lanatus ClCG10G015210 Dof zinc finger protein CG_Chr10 - View
Citrullus lanatus ClCG06G016160 Dof zinc finger protein CG_Chr06 - View
Citrullus lanatus ClCG05G024190 Dof zinc finger protein CG_Chr05 - View
Cucumis melo MELO3C009859.2 cyclic dof factor 2 chr04 - View
Cucumis melo MELO3C017178.2 cyclic dof factor 3 chr02 - View
Cucumis melo MELO3C012104.2 cyclic dof factor 1 chr10 - View
Chenopodium quinoa AUR62008425 CDF3: Cyclic dof factor 3 C_Quinoa_Scaffold_3422 + View
Chenopodium quinoa AUR62034427 CDF2: Cyclic dof factor 2 C_Quinoa_Scaffold_2742 + View
Capsella rubella Carub.0002s1624 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED scaffold_2 - View
Capsella rubella Carub.0007s3629 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_1G002390 cyclic dof factor 3 chr1 + View
Cucumis sativus L. CsaV3_5G032810 cyclic dof factor 1 chr5 + View
Cucumis sativus L. CsaV3_3G041310 cyclic dof factor 2 chr3 + View
Daucus carota DCAR_031013 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_027420 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_007160 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv11522 GWHABJS00000012 + View
Davidia involucrata Dinv16658 GWHABJS00000018 + View
Davidia involucrata Dinv33771 GWHABJS00000014 + View
Davidia involucrata Dinv38720 GWHABJS00000019 - View
Durio zibethinus Duzib205G1231 NW_019168381.1 + View
Durio zibethinus Duzib264G0349 NW_019167960.1 + View
Durio zibethinus Duzib068G0179 NW_019167838.1 + View
Durio zibethinus Duzib251G0890 NW_019167971.1 - View
Durio zibethinus Duzib147G1585 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168470.1 - View
Erigeron canadensis ECA238G0136 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.K02480 Chr11 + View
Eucalyptus grandis Eucgr.G02493 Chr07 - View
Eucalyptus grandis Eucgr.I01947 Chr09 + View
Erythranthe guttata Migut.L01278 scaffold_12 - View
Erythranthe guttata Migut.D01811 scaffold_4 - View
Erythranthe guttata Migut.K01320 scaffold_11 - View
Eutrema salsugineum Thhalv10018679m.g PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10007936m.g PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10027747m.g PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_14 - View
Fragaria x ananassa FAN05G2059 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb6-3 - View
Fragaria x ananassa FAN14G0745 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6-1 + View
Fragaria x ananassa FAN17G2154 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-2 + View
Fragaria vesca FvH4_6g48270 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6 - View
Gossypium hirsutum Gohir.A09G014900 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED A09 - View
Gossypium hirsutum Gohir.D09G013450 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED D09 - View
Gossypium hirsutum Gohir.D11G073900 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D11 + View
Glycine max Glyma.02G108600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm02 + View
Glycine max Glyma.13G062500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm13 - View
Glycine max Glyma.19G023200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm19 + View
Glycine max Glyma.17G101000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm17 + View
Glycine max Glyma.18G260500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm18 + View
Glycine max Glyma.09G237000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm09 - View
Glycine max Glyma.20G035200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm20 - View
Gossypium raimondii Gorai.007G079300 Chr07 + View
Gossypium raimondii Gorai.006G015500 Chr06 - View
Gossypium raimondii Gorai.008G193700 Chr08 + View
Helianthus annuus HanXRQChr14g0449741 Probable cycling DOF factor 2 HanXRQChr14 - View
Lupinus albus Lalb_Chr17g0340791 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr17 + View
Lupinus albus Lalb_Chr02g0159311 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0175291 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Lalb_Chr06 - View
Lupinus albus Lalb_Chr08g0235691 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr08 - View
Lupinus albus Lalb_Chr21g0318671 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Lalb_Chr21 - View
Lupinus albus Lalb_Chr13g0303181 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr13 - View
Lotus japonicus Lj2g0003484 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr2 + View
Lotus japonicus Lj1g0022885 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr1 - View
Lonicera japonica Lj5A110T126 GWHAAZE00000005 - View
Lonicera japonica Lj9A464T86 GWHAAZE00000009 + View
Lonicera japonica Lju41C11G7 GWHAAZE00000094 + View
Lonicera japonica Lj3A1036T38 GWHAAZE00000003 - View
Lonicera japonica Lj4A110T79 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_8_51160 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_5_19880 PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_2_88380 Lsat_1_v8_lg_2 - View
Malus domestica MD14G1201600 cycling DOF factor 3 Chr14 + View
Manihot esculenta Manes.14G079000 Chromosome14 + View
Manihot esculenta Manes.05G103100 Chromosome05 + View
Manihot esculenta Manes.01G092100 Chromosome01 + View
Manihot esculenta Manes.02G047133 Chromosome02 + View
Medicago truncatula Medtr6g012450 DOF-type zinc finger DNA-binding family protein chr6 + View
Medicago truncatula Medtr7g010950 DOF-type zinc finger DNA-binding family protein chr7 + View
Nicotiana tabacum Nitab4.5_0000568g0020 Zinc finger, Dof-type Nitab4.5_0000568 + View
Nicotiana tabacum Nitab4.5_0000274g0250 Zinc finger, Dof-type Nitab4.5_0000274 + View
Olea europaea Oeu019467.1 chr7 - View
Petunia axillaris Peaxi162Scf00129g10011 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00129 - View
Punica granatum PGR004G1734 NC_045131.1 - View
Punica granatum PGR044G1752 NC_045134.1 - View
Punica granatum PGR119G1540 NC_045132.1 - View
Prunus persica Prupe.3G266200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp03 - View
Pisum sativum Psat3g197760 Dof domain + zinc finger chr3LG5 + View
Populus trichocarpa Potri.017G084600 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED Chr17 + View
Populus trichocarpa Potri.008G087800 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr08 + View
Phaseolus vulgaris Phvul.002G084000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr02 - View
Phaseolus vulgaris Phvul.008G037000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr08 + View
Phaseolus vulgaris Phvul.003G189300 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr03 - View
Quercus lobata QL02p082478 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0167771 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0069900 chr08 - View
Rhododendron simsii Rhsim08G0154300 chr08 - View
Rhododendron simsii Rhsim10G0038600 chr10 + View
Striga asiatica SGA_v2.0_scaffold4G02437 scaffold4 - View
Striga asiatica SGA_v2.0_scaffold56G20002 scaffold56 - View
Striga asiatica SGA_v2.0_scaffold30G12539 scaffold30 + View
Striga asiatica SGA_v2.0_scaffold413G51191 scaffold413 - View
Salix brachista Sabra17G0074500 GWHAAZH00000017 + View
Simmondsia chinensis Sc11g0007130 GWHAASQ00000011 + View
Simmondsia chinensis Sc10g0003530 GWHAASQ00000010 - View
Simmondsia chinensis Sc11g0002010 GWHAASQ00000011 + View
Simmondsia chinensis Sc04g0002690 GWHAASQ00000004 + View
Sechium edule Sed0023411 LG08 + View
Sechium edule Sed0004076 LG01 - View
Sechium edule Sed0005974 LG06 - View
Sechium edule Sed0019073 LG08 - View
Sechium edule Sed0011956 LG06 + View
Sechium edule Sed0027222 LG08 + View
Schrenkiella parvula Sp5g24690 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED ch5-6 - View
Schrenkiella parvula Sp1g22010 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED ch1-1 + View
Schrenkiella parvula Sp7g02350 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED ch7-1 - View
Solanum pennellii Sopen02g016410 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 2 (CDF2) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 Spenn-ch02 - View
Solanum pennellii Sopen02g032780 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 2 (CDF2) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 Spenn-ch02 + View
Solanum pennellii Sopen06g027050 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 3 (CDF3) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400001330 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400033046 Dof zinc finger protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400025129 Zinc finger protein ST4.03ch02 - View
Selenicereus undatus Hund02642 Scaffold_33678 - View
Trochodendron aralioides TAR371G0107 group13 + View
Trochodendron aralioides TAR629G3217 group0 - View
Theobroma cacao Thecc.02G344400 F-box family protein Chromosome_2 - View
Trifolium pratense TPR.G33610 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G8806 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI60G1576 NC_052246.1 + View
Tripterygium wilfordii TWI15G1180 NC_052247.1 - View
Tripterygium wilfordii TWI32G0507 NC_052254.1 + View
Tripterygium wilfordii TWI34G0912 NC_052235.1 - View
Vaccinium macrocarpon vmacro17536 Similar to CDF3: Cyclic dof factor 3 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18190 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0234 CM024070.1 - View
Vitis vinifera GSVIVG01011433001 chr14 + View
Vitis vinifera GSVIVG01007992001 chr17 + View