Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG11G13750 | LG-11 | - | View | |
Arabidopsis lyrata | AL6G26690 | scaffold_6 | + | View | |
Avicennia marina | MSTRG.15429 | ScioBoG_19538_HRSCAF_19626 | - | View | |
Amaranthus hybridus | Ah.10g038380 | AmaHy_arrow1_Scaffold_10 | + | View | |
Amaranthus hybridus | Ah.16g100820 | AmaHy_arrow1_Scaffold_16 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.V9ZUVQ | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.01 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.Q3JRQN | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arabidopsis thaliana | AT5G15820 | RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1)%3B Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2461%3B Fungi - 626%3B Plants - 4186%3B Viruses - 29%3B Other Eukaryotes - 1112 (source: NCBI BLink). | Chr5 | + | View |
Arabidopsis thaliana | AT3G30460 | RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1)%3B Has 10074 Blast hits to 10050 proteins in 286 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2769%3B Fungi - 830%3B Plants - 4947%3B Viruses - 70%3B Other Eukaryotes - 1452 (source: NCBI BLink). | Chr3 | + | View |
Brassica carinata | BcaC06g30844 | ChrC06 | - | View | |
Brassica napus | A10p23200 | A10 | - | View | |
Brassica napus | C09p61250 | C09 | - | View | |
Brassica rapa | BraA10t44388Z | A10 | - | View | |
Beta vulgaris | EL10Ac2g04405 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Chr2_EL10_PGA_scaffold6 | - | View |
Beta vulgaris | EL10Ac5g11199 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Chr5_EL10_PGA_scaffold2 | + | View |
Camellia sinensis var. sinensis | CSS0041798 | PREDICTED: E3 ubiquitin-protein ligase Praja-2-like [Solanum tuberosum] | Chr2 | + | View |
Cannabis sativa | CANSAT64G2885 | NC_044379.1 | - | View | |
Corylus avellana | Haze_14353 | Similar to CIP8: E3 ubiquitin-protein ligase CIP8 (Arabidopsis thaliana OX%3D3702) | 5 | - | View |
Carpinus fangiana | Cfa007721 | Cfa03 | + | View | |
Cardamine hirsuta | CARHR197500 | RING/U-box superfamily protein | Chr6 | - | View |
Carya illinoinensis | CiPaw.03G080700 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Chr03 | - | View |
Citrullus lanatus | ClCG11G005060 | RING/U-box superfamily protein LENGTH=348 | CG_Chr11 | + | View |
Cucumis melo | MELO3C022061.2 | E3 ubiquitin-protein ligase RING1-like | chr09 | - | View |
Chenopodium quinoa | AUR62009446 | CIP8: E3 ubiquitin-protein ligase CIP8 | C_Quinoa_Scaffold_3674 | - | View |
Chenopodium quinoa | AUR62032151 | RING1: E3 ubiquitin-protein ligase RING1 | C_Quinoa_Scaffold_1177 | + | View |
Chenopodium quinoa | AUR62023130 | RING1: E3 ubiquitin-protein ligase RING1 | C_Quinoa_Scaffold_1189 | - | View |
Capsella rubella | Carub.0005s0864 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | scaffold_5 | + | View |
Capsella rubella | Carub.0006s1398 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | scaffold_6 | + | View |
Cucumis sativus L. | CsaV3_5G038810 | E3 ubiquitin-protein ligase RING1-like | chr5 | + | View |
Durio zibethinus | Duzib205G0968 | NW_019168381.1 | - | View | |
Durio zibethinus | Duzib068G1366 | NW_019167838.1 | + | View | |
Erigeron canadensis | ECA246G0113 | Conyza_canadensis_scaffold:8 | + | View | |
Eucalyptus grandis | Eucgr.J01430 | Chr10 | + | View | |
Eucalyptus grandis | Eucgr.I02088 | Chr09 | + | View | |
Eucalyptus grandis | Eucgr.B00656 | Chr02 | + | View | |
Erythranthe guttata | Migut.H00571 | scaffold_8 | - | View | |
Eutrema salsugineum | Thhalv10013685m.g | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | scaffold_2 | + | View |
Eutrema salsugineum | Thhalv10005099m.g | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | scaffold_6 | - | View |
Fragaria x ananassa | FAN14G0159 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Fvb6-1 | - | View |
Fragaria x ananassa | FAN18G2262 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Fvb5-1 | - | View |
Fragaria vesca | FvH4_6g46010 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Fvb6 | - | View |
Gossypium hirsutum | Gohir.D03G099200 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | D03 | + | View |
Gossypium hirsutum | Gohir.A03G072600 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | A03 | + | View |
Glycine max | Glyma.08G158300 | PTHR22763//PTHR22763:SF43 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Gm08 | - | View |
Glycine max | Glyma.19G037800 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Gm19 | + | View |
Glycine max | Glyma.13G050800 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Gm13 | - | View |
Gossypium raimondii | Gorai.003G104200 | Chr03 | + | View | |
Helianthus annuus | HanXRQChr15g0472821 | Putative zinc finger, RING/FYVE/PHD-type | HanXRQChr15 | + | View |
Lonicera japonica | Lj4P127T28 | GWHAAZE00000004 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_3_95340 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_3 | - | View |
Malus domestica | MD06G1206700 | RING/U-box superfamily protein | Chr06 | + | View |
Malus domestica | MD17G1068100 | RING/U-box superfamily protein | Chr17 | + | View |
Malus domestica | MD09G1078100 | RING/U-box superfamily protein | Chr09 | + | View |
Manihot esculenta | Manes.02G061800 | Chromosome02 | + | View | |
Manihot esculenta | Manes.01G105300 | Chromosome01 | + | View | |
Nelumbo nucifera | Nn3g17587 | chr3 | + | View | |
Olea europaea | Oeu062194.1 | chr10 | + | View | |
Punica granatum | PGR004G1097 | NC_045131.1 | - | View | |
Prunus persica | Prupe.2G025300 | PTHR22763 - RING ZINC FINGER PROTEIN | Pp02 | - | View |
Prunus persica | Prupe.3G246300 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Pp03 | - | View |
Prunus persica | Prupe.5G211100 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | Pp05 | + | View |
Pisum sativum | Psat1g064000 | Ring finger domain | chr1LG6 | + | View |
Papaver somniferum | PSO478G0192 | NC_039361.1 | - | View | |
Papaver somniferum | PSO017G4357 | NC_039362.1 | + | View | |
Populus trichocarpa | Potri.017G102800 | PF13639 - Ring finger domain (zf-RING_2) | Chr17 | + | View |
Rosa chinensis | RcHm_v2.0_Chr2g0164241 | RcHm_v2.0_Chr2 | - | View | |
Rhododendron simsii | Rhsim08G0078800 | chr08 | + | View | |
Striga asiatica | SGA_v2.0_scaffold52G19047 | scaffold52 | - | View | |
Striga asiatica | SGA_v2.0_scaffold149G36525 | scaffold149 | + | View | |
Salix brachista | Sabra04G0072700 | GWHAAZH00000004 | + | View | |
Sechium edule | Sed0016208 | LG03 | + | View | |
Solanum lycopersicum | Solyc03g114680.3 | RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) | SL4.0ch03 | - | View |
Solanum lycopersicum | Solyc02g089410.3 | RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) | SL4.0ch02 | + | View |
Schrenkiella parvula | Sp6g28290 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | ch6-6 | - | View |
Schrenkiella parvula | Sp2g18190 | PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED | ch2-4 | + | View |
Solanum pennellii | Sopen02g015860 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch02 | - | View |
Solanum pennellii | Sopen05g003750 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch05 | - | View |
Solanum pennellii | Sopen03g033750 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch03 | - | View |
Solanum pennellii | Sopen02g034170 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch02 | + | View |
Solanum tuberosum | PGSC0003DMG400026558 | Zinc finger protein | ST4.03ch02 | - | View |
Solanum tuberosum | PGSC0003DMG400001386 | Zinc finger protein | ST4.03ch02 | - | View |
Solanum tuberosum | PGSC0003DMG400018407 | Zinc finger protein | ST4.03ch05 | + | View |
Solanum tuberosum | PGSC0003DMG400024614 | Zinc finger protein | ST4.03ch03 | - | View |
Theobroma cacao | Thecc.02G319000 | Uncharacterized protein | Chromosome_2 | - | View |
Theobroma cacao | Thecc.04G111200 | Uncharacterized protein | Chromosome_4 | + | View |
Trifolium pratense | TPR.G15945 | Tp57577_TGAC_v2_LG3 | + | View | |
Tripterygium wilfordii | TWI34G1377 | NC_052235.1 | - | View | |
Vigna mungo | VMungo0464G1815 | CM024077.1 | + | View |