Gene: Sopen05g003750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g003750
  • Transcript Identifier Sopen05g003750.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 2556524-2557111 : negative

Gene Family Information

  • ID HOM05D000082
  • #Genes/#Species 3688/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g003750.1

Descriptions

  • Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT1G14200
GO:0071629
ISO
PLAZA Integrative Orthologycytoplasm protein quality control by the ubiquitin-proteasome system AT1G26800
GO:0000209
ISO
PLAZA Integrative Orthologyprotein polyubiquitination AT1G26800
GO:0061635
ISO
PLAZA Integrative Orthologyregulation of protein complex stability AT1G26800
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT1G26800
GO:0071218
ISO
PLAZA Integrative Orthologycellular response to misfolded protein AT1G26800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G26800
GO:0051787
ISO
PLAZA Integrative Orthologymisfolded protein binding AT1G26800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G26800
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G26800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.9 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SNIPER)