Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia17550 | Lachesis_group21 | - | View | |
Actinidia chinensis | Actinidia38764 | Lachesis_group4 | + | View | |
Actinidia chinensis | Actinidia34995 | Lachesis_group2 | - | View | |
Actinidia chinensis | Actinidia04902 | Lachesis_group1 | - | View | |
Avicennia marina | MSTRG.4424 | ScioBoG_102837_HRSCAF_103074 | + | View | |
Aquilegia oxysepala | Aqoxy1G00738 | CHR01 | + | View | |
Aquilegia oxysepala | Aqoxy3G03317 | CHR03 | - | View | |
Aquilegia oxysepala | Aqoxy3G00806 | CHR03 | + | View | |
Arabidopsis thaliana | AT5G39680 | Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 2744 (EMB2744)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1)%3B Has 37711 Blast hits to 13427 proteins in 206 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 37%3B Fungi - 23%3B Plants - 37282%3B Viruses - 0%3B Other Eukaryotes - 369 (source: NCBI BLink). | Chr5 | - | View |
Capsicum annuum | CAN.G394.121 | PGAv.1.6.scaffold394 | + | View | |
Corylus avellana | Haze_03010 | Similar to PCMP-E48: Pentatricopeptide repeat-containing protein At2g21090 (Arabidopsis thaliana OX%3D3702) | 1 | - | View |
Coffea canephora | Cc01_g14100 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic | chr1 | + | View |
Citrus clementina | Ciclev10018999m.g | scaffold_3 | + | View | |
Citrullus lanatus | ClCG10G015070 | Pentatricopeptide repeat-containing family protein | CG_Chr10 | - | View |
Citrullus lanatus | ClCG03G000810 | Pentatricopeptide repeat-containing family protein | CG_Chr03 | - | View |
Citrullus lanatus | ClCG05G024240 | Pentatricopeptide repeat-containing family protein | CG_Chr05 | - | View |
Cucumis melo | MELO3C012100.2 | ribonuclease 3-like | chr10 | - | View |
Chenopodium quinoa | AUR62008421 | PCMP-H76: Pentatricopeptide repeat-containing protein At3g47530 | C_Quinoa_Scaffold_3422 | + | View |
Chenopodium quinoa | AUR62001660 | PCMP-H33: Pentatricopeptide repeat-containing protein At2g29760, chloroplastic | C_Quinoa_Scaffold_2716 | - | View |
Cucumis sativus L. | CsaV3_1G036130 | Pentatricopeptide repeat | chr1 | + | View |
Cucumis sativus L. | CsaV3_1G002340 | Pentatricopeptide repeat-containing protein | chr1 | + | View |
Cucumis sativus L. | CsaV3_3G041380 | ribonuclease MC-like | chr3 | - | View |
Cucumis sativus L. | CsaV3_5G038060 | ribonuclease 1-like isoform X2 | chr5 | + | View |
Daucus carota | DCAR_007156 | hypothetical protein | DCARv2_Chr2 | + | View |
Davidia involucrata | Dinv14453 | GWHABJS00000007 | + | View | |
Davidia involucrata | Dinv33763 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib068G0420 | NW_019167838.1 | - | View | |
Durio zibethinus | Duzib168G1686 | NW_019168159.1 | - | View | |
Erigeron canadensis | ECA248G3722 | Conyza_canadensis_scaffold:9 | + | View | |
Erigeron canadensis | ECA233G2882 | Conyza_canadensis_scaffold:1 | - | View | |
Eutrema salsugineum | Thhalv10027662m.g | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | scaffold_14 | + | View |
Eutrema salsugineum | Thhalv10015396m.g | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | scaffold_2 | - | View |
Fragaria x ananassa | FAN10G2721 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Fvb7-1 | + | View |
Fragaria x ananassa | FAN10G0362 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Fvb7-1 | + | View |
Fragaria x ananassa | FAN01G2244 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Fvb7-4 | - | View |
Gossypium hirsutum | Gohir.A05G366600 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | A05 | - | View |
Gossypium hirsutum | Gohir.A11G070500 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | A11 | - | View |
Glycine max | Glyma.18G259800 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Gm18 | - | View |
Glycine max | Glyma.18G200433 | Gm18 | - | View | |
Gossypium raimondii | Gorai.007G079800 | Chr07 | - | View | |
Gossypium raimondii | Gorai.009G091500 | Chr09 | - | View | |
Lotus japonicus | Lj6g0009714 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | chr6 | - | View |
Lotus japonicus | Lj2g0015722 | PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) | chr2 | - | View |
Magnolia biondii | MBI05_g03466_MAGBIO | AED:0.52 | Chr05 | + | View |
Nelumbo nucifera | Nn2g14846 | chr2 | + | View | |
Olea europaea | Oeu017692.1 | chr17 | - | View | |
Olea europaea | Oeu019473.1 | chr7 | + | View | |
Petunia axillaris | Peaxi162Scf00059g01813 | Mannan endo-1,4-beta-mannosidase 2 | Peaxi162Scf00059 | - | View |
Prunus persica | Prupe.6G058800 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Pp06 | - | View |
Populus trichocarpa | Potri.009G044700 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Chr09 | + | View |
Populus trichocarpa | Potri.017G083900 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Chr17 | - | View |
Rhododendron simsii | Rhsim03G0142600 | chr03 | - | View | |
Salvia bowleyana | SalBow1G7280 | GWHASIU00000001 | - | View | |
Salix brachista | Sabra08G0064600 | GWHAAZH00000008 | + | View | |
Salix brachista | Sabra17G0074100 | GWHAAZH00000017 | - | View | |
Salix brachista | Sabra09G0032300 | GWHAAZH00000009 | + | View | |
Sechium edule | Sed0017935 | LG03 | + | View | |
Sechium edule | Sed0020784 | LG08 | - | View | |
Sechium edule | Sed0027914 | LG06 | + | View | |
Sechium edule | Sed0016252 | LG12 | + | View | |
Sechium edule | Sed0027655 | LG11 | - | View | |
Solanum lycopersicum | Solyc09g014260.1 | Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G3AMK9_CAPAN) | SL4.0ch09 | - | View |
Solanum lycopersicum | Solyc06g076900.4 | Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q7P3_9MAGN) | SL4.0ch06 | + | View |
Schrenkiella parvula | Sp7g02330 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | ch7-1 | + | View |
Solanum pennellii | Sopen06g033290 | Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein | Spenn-ch06 | + | View |
Solanum tuberosum | PGSC0003DMG400046574 | Pentatricopeptide repeat-containing protein, chloroplastic | ST4.03ch06 | + | View |
Tripterygium wilfordii | TWI60G1198 | NC_052246.1 | + | View |