Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc04g0008050 GWHAASQ00000004 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G850 LG-1 + View
Aethionema arabicum Aa31LG7G8320 LG-7 + View
Acer truncatum Atru.chr11.1776 chr11 - View
Actinidia chinensis Actinidia11477 Lachesis_group21 - View
Actinidia chinensis Actinidia12286 Lachesis_group4 - View
Actinidia chinensis Actinidia26224 Lachesis_group3 - View
Actinidia chinensis Actinidia33202 Lachesis_group12 - View
Arabidopsis lyrata AL1G26080 scaffold_1 - View
Arabidopsis lyrata AL1G38880 scaffold_1 + View
Avicennia marina MSTRG.23931 ScioBoG_3895_HRSCAF_3912 - View
Amaranthus hybridus Ah.02g129650 E3 ubiquitin-protein ligase MPSR1 (EC 2.3.2.27) (Protein MISFOLDED PROTEIN SENSING RING E3 LIGASE 1) (RING-type E3 ubiquitin transferase MPSR1) AmaHy_arrow1_Scaffold_2 - View
Amaranthus hybridus Ah.03g134950 AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy3G03412 CHR03 + View
Arabidopsis thaliana AT2G03000 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1)%3B Has 30893 Blast hits to 17053 proteins in 804 species: Archae - 45%3B Bacteria - 3195%3B Metazoa - 9909%3B Fungi - 5711%3B Plants - 4804%3B Viruses - 543%3B Other Eukaryotes - 6686 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G26800 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14200.1)%3B Has 9899 Blast hits to 9869 proteins in 270 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2681%3B Fungi - 828%3B Plants - 5098%3B Viruses - 14%3B Other Eukaryotes - 1278 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G14200 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G26800.1)%3B Has 10250 Blast hits to 10222 proteins in 289 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2721%3B Fungi - 824%3B Plants - 5163%3B Viruses - 73%3B Other Eukaryotes - 1463 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0068G051 AmTr_v1.0_scaffold00119 + View
Amborella trichopoda ATR0564G158 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaC07g41590 ChrC07 + View
Brassica carinata BcaC06g35120 ChrC06 + View
Brassica carinata BcaC05g25316 ChrC05 - View
Brassica carinata BcaC06g34024 ChrC06 - View
Brassica carinata BcaB03g12009 ChrB03 - View
Brassica carinata BcaB03g14090 ChrB03 - View
Brassica carinata BcaC07g39269 ChrC07 + View
Brassica napus A09p62370 A09 + View
Brassica napus C08p45930 C08 + View
Brassica napus A06p10180 A06 - View
Brassica napus A08p27550 A08 - View
Brassica napus A09p40230 A09 - View
Brassica napus A07p13120 A07 - View
Brassica napus C07p19610 C07 - View
Brassica napus C05p11980 C05 - View
Brassica oleracea BolC5t29954H C5 - View
Brassica oleracea BolC8t49915H C8 + View
Brassica oleracea BolC8t52145H C8 + View
Brassica rapa BraA08t34694Z A08 - View
Brassica rapa BraA09t41602Z A09 + View
Brassica rapa BraA09t39521Z A09 - View
Beta vulgaris EL10Ac6g13218 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0049187 zinc finger family protein [Populus trichocarpa] Chr12 - View
Capsicum annuum CAN.G206.157 PGAv.1.6.scaffold206 + View
Cannabis sativa CANSAT64G0993 NC_044379.1 - View
Cannabis sativa CANSAT64G1457 NC_044379.1 + View
Cicer arietinum L. Ca_04814_v3 Ca_LG2_v3 + View
Corylus avellana Haze_14518 Similar to MPSR1: E3 ubiquitin-protein ligase MPSR1 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_12003 Similar to MPSR1: E3 ubiquitin-protein ligase MPSR1 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_07353 Similar to RDUF1: E3 ubiquitin-protein ligase RDUF1 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc11_g12900 Putative RING/U-box superfamily protein chr11 - View
Coffea canephora Cc07_g03450 Putative RING/U-box superfamily protein chr7 + View
Citrus clementina Ciclev10032639m.g scaffold_4 + View
Ceratophyllum demersum CDE04G1399 2 - View
Carpinus fangiana Cfa008971 Cfa03 - View
Carpinus fangiana Cfa007568 Cfa03 + View
Cardamine hirsuta CARHR025130 RING/U-box superfamily protein Chr1 + View
Cardamine hirsuta CARHR014610 RING/U-box superfamily protein Chr1 - View
Carya illinoinensis CiPaw.05G134100 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr05 - View
Citrullus lanatus ClCG09G018180 RING/U-box superfamily protein LENGTH=204 CG_Chr09 - View
Citrullus lanatus ClCG05G024210 RING/U-box superfamily protein LENGTH=204 CG_Chr05 - View
Cucumis melo MELO3C012103.2 E3 ubiquitin-protein ligase RING1-like chr10 - View
Cucumis melo MELO3C021991.2 E3 ubiquitin-protein ligase RING1-like chr09 - View
Corchorus olitorius COL.COLO4_22956 Zinc finger%2C RING-type AWUE01018132.1 - View
Carica papaya Cpa.g.sc128.37 supercontig_128 + View
Chenopodium quinoa AUR62032795 At3g19950: E3 ubiquitin-protein ligase RING1-like C_Quinoa_Scaffold_3751 + View
Capsella rubella Carub.0005s0182 PF11781//PF13639 - RNA polymerase I-specific transcription initiation factor Rrn7 (RRN7) // Ring finger domain (zf-RING_2) scaffold_5 + View
Capsella rubella Carub.0001s1388 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_1 - View
Capsella rubella Carub.0001s2417 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_5G038090 E3 ubiquitin-protein ligase RING1-like chr5 + View
Cucumis sativus L. CsaV3_5G032780 E3 ubiquitin-protein ligase RING1-like chr5 + View
Daucus carota DCAR_007158 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv11520 GWHABJS00000012 + View
Davidia involucrata Dinv16655 GWHABJS00000018 + View
Durio zibethinus Duzib248G1345 NW_019168048.1 + View
Durio zibethinus Duzib251G0205 NW_019167971.1 - View
Durio zibethinus Duzib264G0457 NW_019167960.1 + View
Durio zibethinus Duzib268G0080 NW_019168270.1 - View
Durio zibethinus Duzib147G1344 NW_019168470.1 - View
Erigeron canadensis ECA246G3309 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.G02496 Chr07 - View
Erythranthe guttata Migut.L01280 scaffold_12 - View
Erythranthe guttata Migut.H00930 scaffold_8 + View
Eutrema salsugineum Thhalv10009557m.g PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_5 + View
Eutrema salsugineum Thhalv10009887m.g PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_5 - View
Fragaria x ananassa FAN17G2787 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 Fvb4-2 - View
Fragaria x ananassa FAN09G2954 PF13639 - Ring finger domain (zf-RING_2) Fvb6-2 + View
Fragaria x ananassa FAN02G1362 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN17G2074 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-2 + View
Fragaria x ananassa FAN22G1269 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-1 - View
Fragaria x ananassa FAN12G0656 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria x ananassa FAN07G0621 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4-4 + View
Fragaria vesca FvH4_6g48331 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6 - View
Fragaria vesca FvH4_4g31250 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb4 - View
Gossypium hirsutum Gohir.A09G015100 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 A09 - View
Gossypium hirsutum Gohir.D09G013600 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 D09 - View
Gossypium hirsutum Gohir.D04G048000 PF13639 - Ring finger domain (zf-RING_2) D04 - View
Glycine max Glyma.01G048700 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm01 + View
Glycine max Glyma.02G108300 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm02 + View
Gossypium raimondii Gorai.012G053500 Chr12 - View
Gossypium raimondii Gorai.006G015700 Chr06 - View
Helianthus annuus HanXRQChr08g0210911 Probable RING/U-box superfamily protein HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0795F.1_g218930 Hma1.2p1_0795F.1 + View
Hydrangea macrophylla Hma1.2p1_0409F.1_g146910 Hma1.2p1_0409F.1 + View
Lupinus albus Lalb_Chr10g0098341 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lotus japonicus Lj2g0016541 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lj6P786T60 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_3_98920 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_8_52720 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 - View
Magnolia biondii MBI05_g10780_MAGBIO AED:0.13 Chr05 + View
Malus domestica MD13G1071200 RING/U-box superfamily protein Chr13 - View
Malus domestica MD09G1052200 RING/U-box superfamily protein Chr09 + View
Malus domestica MD16G1071900 RING/U-box superfamily protein Chr16 - View
Manihot esculenta Manes.05G102000 Chromosome05 + View
Manihot esculenta Manes.01G036200 Chromosome01 - View
Manihot esculenta Manes.01G091800 Chromosome01 + View
Medicago truncatula Medtr5g041310 zinc finger, C3HC4 type (RING finger) protein chr5 + View
Nelumbo nucifera Nn4g23189 chr4 + View
Nelumbo nucifera Nn3g17260 chr3 + View
Nicotiana tabacum Nitab4.5_0000274g0230 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0000274 + View
Nicotiana tabacum Nitab4.5_0000040g0270 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000040 - View
Olea europaea Oeu028293.1 scaffold236 - View
Olea europaea Oeu019472.1 chr7 - View
Olea europaea Oeu014035.1 chr12 - View
Oryza sativa ssp. japonica Os07g0631200 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr07 + View
Oryza sativa ssp. japonica Os03g0377600 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr03 - View
Petunia axillaris Peaxi162Scf00129g00127 Unknown protein Peaxi162Scf00129 - View
Petunia axillaris Peaxi162Scf00222g00058 Unknown protein Peaxi162Scf00222 - View
Petunia axillaris Peaxi162Scf00451g00713 RING/U-box superfamily protein Peaxi162Scf00451 - View
Punica granatum PGR102G0748 NC_045129.1 + View
Punica granatum PGR004G1884 NC_045131.1 - View
Prunus persica Prupe.1G275700 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp01 + View
Prunus persica Prupe.3G266500 PF13639 - Ring finger domain (zf-RING_2) Pp03 - View
Papaver somniferum PSO832G1690 NC_039367.1 + View
Papaver somniferum PSO339G1410 NC_039366.1 - View
Papaver somniferum PSO384G3570 NC_039368.1 + View
Populus trichocarpa Potri.010G168300 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr10 - View
Populus trichocarpa Potri.008G087200 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Phaseolus vulgaris Phvul.002G084300 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr02 - View
Quercus lobata QL03p068727 3 - View
Quercus lobata QL10p017068 10 - View
Quercus lobata QL02p082432 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0439691 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim10G0038400 chr10 + View
Rhododendron simsii Rhsim08G0070100 chr08 - View
Striga asiatica SGA_v2.0_scaffold413G51195 scaffold413 - View
Striga asiatica SGA_v2.0_scaffold53G19335 scaffold53 - View
Striga asiatica SGA_v2.0_scaffold63G21650 scaffold63 - View
Striga asiatica SGA_v2.0_scaffold389G50558 scaffold389 - View
Salix brachista Sabra08G0065000 GWHAAZH00000008 + View
Salix brachista Sabra10G0128100 GWHAAZH00000010 - View
Solanum lycopersicum Solyc04g005740.1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A1I9LQQ9_ARATH) SL4.0ch04 + View
Solanum lycopersicum Solyc05g007895.1 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LJE9_ARATH) SL4.0ch05 - View
Solanum lycopersicum Solyc02g088030.1 RING/U-box superfamily protein (AHRD V3.3 *-* Q9LJE9_ARATH) SL4.0ch02 + View
Schrenkiella parvula Sp1g12540 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch1-1 - View
Schrenkiella parvula Sp2g14040 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch2-4 + View
Schrenkiella parvula Sp1g21990 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch1-1 + View
Solanum pennellii Sopen02g016440 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 - View
Solanum pennellii Sopen05g003750 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch05 - View
Solanum pennellii Sopen04g001790 hypothetical protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400046475 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400002830 Zinc finger protein ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400018407 Zinc finger protein ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400006629 Zinc finger protein ST4.03ch02 - View
Trochodendron aralioides TAR629G2341 group0 - View
Theobroma cacao Thecc.02G344800 RING/U-box superfamily protein Chromosome_2 - View
Theobroma cacao Thecc.04G083500 RING/U-box superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.03G082200 Zinc finger protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104808712 E3 ubiquitin-protein ligase RING1-like NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104822911 E3 ubiquitin-protein ligase RDUF1-like NW_010966822.1 - View
Tarenaya hassleriana THA.LOC104801803 E3 ubiquitin-protein ligase RING1 NW_010970030.1 + View
Tarenaya hassleriana THA.LOC104805165 E3 ubiquitin-protein ligase RING1-like NW_010961290.1 + View
Tripterygium wilfordii TWI79G0903 NC_052238.1 + View
Utricularia gibba unitig_22.g6512 unitig_22 - View
Vanilla planifolia HPP92_002358 RING/U-box superfamily protein *** CM028150.1 + View
Vitis vinifera GSVIVG01019972001 chr1 + View
Zea mays Zm00001eb015480 Zm00001e101484 RING/U-box superfamily protein 1 + View