Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG7G8100 | LG-7 | - | View | |
| Acer truncatum | Atru.chr11.1862 | chr11 | + | View | |
| Actinidia chinensis | Actinidia08212 | Lachesis_group15 | + | View | |
| Actinidia chinensis | Actinidia19855 | Lachesis_group10 | + | View | |
| Arabidopsis lyrata | AL1G38440 | scaffold_1 | - | View | |
| Avicennia marina | MSTRG.2362 | ScioBoG_102834_HRSCAF_103055 | + | View | |
| Avicennia marina | MSTRG.13399 | ScioBoG_18778_HRSCAF_18863 | - | View | |
| Aquilegia oxysepala | Aqoxy3G03257 | CHR03 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.D3ZUUX | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | arahy.Tifrunner.gnm1.Arahy.15 | - | View |
| Arabidopsis thaliana | AT1G27050 | homeobox leucine zipper protein Encodes a protein with a RNA recognition motif. Previously annotated as ATHB54%2C a homeodomain leucine zipper (HD-Zip) family protein. In the TAIR10 genome release (2010)%2C this locus was split into two loci: AT1G27045 (containing homeodomain and leucine zipper domains) and AT1G27050 (containing a RNA recognition motif). AT1G27045 is now named ATHB54. Note that Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein). homeobox protein 54 (HB54)%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B Has 5308 Blast hits to 5298 proteins in 368 species: Archae - 2%3B Bacteria - 4%3B Metazoa - 3484%3B Fungi - 119%3B Plants - 1607%3B Viruses - 0%3B Other Eukaryotes - 92 (source: NCBI BLink). | Chr1 | + | View |
| Brassica carinata | BcaC06g35095 | ChrC06 | - | View | |
| Brassica carinata | BcaB03g14102 | ChrB03 | + | View | |
| Brassica napus | A07p13280 | A07 | + | View | |
| Brassica napus | C07p19880 | C07 | + | View | |
| Brassica rapa | BraA07t29098Z | A07 | + | View | |
| Beta vulgaris | EL10Ac6g13141 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr6_EL10_PGA_scaffold0 | - | View |
| Camellia sinensis var. sinensis | CSS0012607 | unnamed protein product [Coffea canephora] | Chr12 | + | View |
| Corylus avellana | Haze_12073 | Similar to At1g27050: Uncharacterized protein At1g27050 (Arabidopsis thaliana OX%3D3702) | 9 | + | View |
| Coffea canephora | Cc11_g13560 | Putative Uncharacterized protein At1g27050 | chr11 | - | View |
| Citrus clementina | Ciclev10032837m.g | scaffold_4 | - | View | |
| Carpinus fangiana | Cfa009043 | Cfa03 | + | View | |
| Cardamine hirsuta | CARHR024860 | homeobox protein 54 | Chr1 | - | View |
| Carya illinoinensis | CiPaw.05G140500 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr05 | + | View |
| Carya illinoinensis | CiPaw.06G080300 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr06 | - | View |
| Citrullus lanatus | ClCG05G024650 | homeobox protein 54 LENGTH=205 | CG_Chr05 | + | View |
| Cucumis melo | MELO3C012060.2 | Homeobox transcription factor | chr10 | + | View |
| Chenopodium quinoa | AUR62026455 | At1g27050: Uncharacterized protein At1g27050 | C_Quinoa_Scaffold_4244 | + | View |
| Chenopodium quinoa | AUR62026264 | At1g27050: Uncharacterized protein At1g27050 | C_Quinoa_Scaffold_3298 | + | View |
| Capsella rubella | Carub.0001s2392 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_1 | - | View |
| Cucumis sativus L. | CsaV3_5G032280 | Homeobox transcription factor | chr5 | - | View |
| Daucus carota | DCAR_031058 | hypothetical protein | DCARv2_Chr9 | - | View |
| Davidia involucrata | Dinv24949 | GWHABJS00000018 | - | View | |
| Durio zibethinus | Duzib248G0483 | NW_019168048.1 | + | View | |
| Erigeron canadensis | ECA246G4987 | Conyza_canadensis_scaffold:8 | + | View | |
| Eucalyptus grandis | Eucgr.B03407 | Chr02 | + | View | |
| Erythranthe guttata | Migut.E00119 | scaffold_5 | + | View | |
| Eutrema salsugineum | Thhalv10008803m.g | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_5 | + | View |
| Fragaria x ananassa | FAN12G0628 | PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) | Fvb4-3 | - | View |
| Fragaria x ananassa | FAN07G0059 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4-4 | + | View |
| Fragaria x ananassa | FAN22G0202 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb4-1 | + | View |
| Fragaria vesca | FvH4_4g32080 | PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) | Fvb4 | + | View |
| Gossypium hirsutum | Gohir.D05G323400 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | D05 | + | View |
| Glycine max | Glyma.01G041651 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm01 | - | View |
| Glycine max | Glyma.02G022351 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm02 | + | View |
| Lupinus albus | Lalb_Chr10g0097941 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Lalb_Chr10 | - | View |
| Lactuca sativa | Lsat_1_v5_gn_3_49860 | Lsat_1_v8_lg_3 | - | View | |
| Malus domestica | MD13G1079700 | homeobox protein 54 | Chr13 | + | View |
| Manihot esculenta | Manes.05G095900 | Chromosome05 | - | View | |
| Medicago truncatula | Medtr5g038225 | homeobox transcription factor | chr5 | - | View |
| Nelumbo nucifera | Nn4g23028 | chr4 | - | View | |
| Petunia axillaris | Peaxi162Scf00209g00516 | homeobox protein 54 | Peaxi162Scf00209 | + | View |
| Punica granatum | PGR119G1700 | NC_045132.1 | + | View | |
| Prunus persica | Prupe.1G267100 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Pp01 | - | View |
| Papaver somniferum | PSO591G0176 | NW_020621603.1 | - | View | |
| Populus trichocarpa | Potri.010G034500 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr10 | + | View |
| Phaseolus vulgaris | Phvul.002G067300 | KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) | Chr02 | - | View |
| Quercus lobata | QL03p065949 | 3 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr4g0440771 | RcHm_v2.0_Chr4 | + | View | |
| Rhododendron simsii | Rhsim12G0129600 | chr12 | - | View | |
| Striga asiatica | SGA_v2.0_scaffold87G26973 | scaffold87 | + | View | |
| Salvia bowleyana | SalBow8G2121 | GWHASIU00000004 | - | View | |
| Salix brachista | Sabra10G0030300 | GWHAAZH00000010 | - | View | |
| Sechium edule | Sed0013591 | LG06 | + | View | |
| Solanum lycopersicum | Solyc05g006960.3 | homeobox leucine zipper protein (AHRD V3.3 *** AT1G27050.1) | SL4.0ch05 | - | View |
| Schrenkiella parvula | Sp1g21730 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | ch1-1 | - | View |
| Solanum pennellii | Sopen05g002920 | Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. | homeobox protein 54 (HB54) | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | Spenn-ch05 | - | View |
| Solanum tuberosum | PGSC0003DMG400017639 | Homeobox-leucine zipper protein ATHB-54 | ST4.03ch05 | + | View |
| Selenicereus undatus | Hund05917 | Scaffold_19641 | + | View | |
| Theobroma cacao | Thecc.02G232500 | Homeobox-leucine zipper protein ATHB-54 | Chromosome_2 | - | View |
| Tarenaya hassleriana | THA.LOC104822931 | uncharacterized protein At1g27050 | NW_010966822.1 | + | View |
| Tripterygium wilfordii | TWI75G0120 | NC_052253.1 | - | View | |
| Utricularia gibba | unitig_62.g23683 | unitig_62 | - | View | |
| Vaccinium macrocarpon | vmacro16323 | Similar to At1g27050: Uncharacterized protein At1g27050 (Arabidopsis thaliana OX%3D3702) | chr4_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo1215G3437 | CM024074.1 | + | View | |
| Vitis vinifera | GSVIVG01020080001 | chr1 | - | View |