Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.4e-78 295.8 192 100.0
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 5.3e-46 188.3 204 62.3
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 7.7e-45 184.5 193 64.2
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 5.7e-40 168.3 198 50.5
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.2e-39 166.4 198 49.5
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 2.2e-39 166.4 199 48.7
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.1e-38 164.1 197 50.3
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 5.3e-38 161.8 201 49.3
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 2.0e-37 159.8 207 47.8
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 5.9e-37 158.3 200 47.0
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 7.7e-37 157.9 198 48.5
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.0e-36 157.5 194 48.5
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.3e-36 157.1 197 48.7
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 5.0e-36 155.2 203 46.8
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 6.5e-36 154.8 194 47.4
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 8.5e-36 154.5 207 47.3
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.1e-35 154.1 195 57.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 1.5e-35 153.7 209 52.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.5e-35 153.7 206 48.1
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.9e-35 153.3 203 46.8
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 2.5e-35 152.9 201 56.7
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 2.5e-35 152.9 149 56.4
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 4.2e-35 152.1 201 46.3
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 5.5e-35 151.8 209 45.5
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 5.5e-35 151.8 198 49.5
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 5.5e-35 151.8 206 48.1
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 5.5e-35 151.8 206 48.1
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 7.2e-35 151.4 194 50.5
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 7.2e-35 151.4 209 46.4
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 7.2e-35 151.4 199 54.8
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 9.4e-35 151.0 204 57.4
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 9.4e-35 151.0 208 50.5
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.2e-34 150.6 210 45.7
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.1e-34 149.8 200 58.5
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 2.1e-34 149.8 207 49.3
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 2.7e-34 149.4 202 46.0
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.7e-34 149.4 199 47.7
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 3.6e-34 149.1 194 47.4
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 3.6e-34 149.1 201 49.3
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.7e-34 148.7 148 54.7
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 6.1e-34 148.3 201 45.3
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 6.1e-34 148.3 202 52.5
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 6.1e-34 148.3 196 48.5
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.0e-34 147.9 207 45.9
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 8.0e-34 147.9 194 47.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.0e-33 147.5 217 51.6
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.4e-33 147.1 207 46.9
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.8e-33 146.7 149 55.7
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.0e-33 145.6 207 46.9
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.2e-33 145.2 200 46.0
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 5.2e-33 145.2 221 45.2
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 5.2e-33 145.2 203 49.8
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.2e-33 145.2 226 42.9
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 6.7e-33 144.8 226 51.8
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 8.8e-33 144.4 205 47.3
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 8.8e-33 144.4 205 47.3
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 8.8e-33 144.4 203 55.2
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.2e-32 144.1 211 49.8
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.5e-32 143.7 208 44.2
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 2.6e-32 142.9 156 53.8
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 5.7e-32 141.7 198 49.0
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 7.5e-32 141.4 205 44.9
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 7.5e-32 141.4 206 44.2
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 7.5e-32 141.4 197 46.7
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.3e-31 140.6 195 45.6
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.2e-31 139.8 152 52.0
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 2.8e-31 139.4 212 44.3
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 3.7e-31 139.0 198 49.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 3.7e-31 139.0 152 54.6
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 4.8e-31 138.7 209 44.5
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 6.3e-31 138.3 206 44.2
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 8.2e-31 137.9 148 53.4
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.1e-30 137.5 200 46.0
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.4e-30 136.3 210 43.8
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 3.1e-30 136.0 206 45.1
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 4.1e-30 135.6 217 45.2
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 5.3e-30 135.2 191 47.6
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 5.3e-30 135.2 168 48.8
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 7.0e-30 134.8 203 45.8
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 7.0e-30 134.8 200 44.0
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 2.7e-29 132.9 205 51.2
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.5e-29 132.5 154 48.7
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.3e-28 130.6 158 50.0
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.3e-28 130.6 132 69.7
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 8.5e-28 127.9 230 39.1
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 3.6e-26 122.5 200 43.0
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 8.0e-26 121.3 252 38.1
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.4e-25 120.6 212 53.3
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.5e-24 117.1 111 73.9
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.5e-24 117.1 208 40.4
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 2.0e-24 116.7 208 41.3
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 7.5e-24 114.8 207 42.0
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 3.7e-23 112.5 160 43.1
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 9.1e-22 107.8 149 43.0
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 5.9e-21 105.1 110 52.7
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 1.8e-17 93.6 148 41.9
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 6.8e-17 91.7 152 43.4
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.5e-16 90.5 143 44.1
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.3e-15 87.4 148 39.9
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 3.7e-15 85.9 123 46.3
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.3e-07 60.8 94 45.7
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.2e-07 60.1 86 44.2


User provided reference genes

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