Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G14570 LG-4 - View
Acer truncatum Atru.chr3.3667 chr3 - View
Actinidia chinensis Actinidia24090 Lachesis_group24 + View
Arabidopsis lyrata AL8G37070 scaffold_8 + View
Arabidopsis lyrata AL5G23860 scaffold_5 - View
Avicennia marina MSTRG.18652 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.21134 ScioBoG_26769_HRSCAF_26899 - View
Amaranthus hybridus Ah.08g216310 Protein indeterminate-domain 7 AmaHy_arrow1_Scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YDP8E4 PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H7D8HY PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G60470 C2H2 and C2HC zinc fingers superfamily protein C2H2 and C2HC zinc fingers superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: stem%2C sepal%2C carpel%2C stamen%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C Zinc finger%2C double-stranded RNA binding (InterPro:IPR022755)%3B BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G45260.1)%3B Has 38003 Blast hits to 17147 proteins in 232 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 35900%3B Fungi - 231%3B Plants - 711%3B Viruses - 1%3B Other Eukaryotes - 1160 (source: NCBI BLink). Chr5 + View
Camellia sinensis var. sinensis CSS0045915 PREDICTED: zinc finger protein JACKDAW-like [Vitis vinifera] Chr11 - View
Capsicum annuum CAN.G1001.24 PGAv.1.6.scaffold1001 + View
Cannabis sativa CANSAT54G1826 NC_044375.1 + View
Cicer arietinum L. Ca_19252_v3 Ca_LG6_v3 + View
Corylus avellana Haze_23885 Similar to BIB: Zinc finger protein BALDIBIS (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g11310 Putative uncharacterized protein chr1 - View
Citrus clementina Ciclev10028294m.g scaffold_8 - View
Carpinus fangiana Cfa003577 Cfa01 + View
Carpinus fangiana Cfa011349 Cfa04 - View
Cardamine hirsuta CARHR274130 Zinc finger protein-like Chr8 + View
Carya illinoinensis CiPaw.01G224200 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr01 + View
Carya illinoinensis CiPaw.09G177700 PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW Chr09 - View
Carya illinoinensis CiPaw.13G109300 PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr13 + View
Citrullus lanatus ClCG03G002260 Zinc finger family protein CG_Chr03 - View
Cucumis melo MELO3C005046.2 protein indeterminate-domain 2 chr12 - View
Cucumis melo MELO3C014250.2 protein indeterminate-domain 9 chr05 + View
Carica papaya Cpa.g.sc216.25 supercontig_216 - View
Chenopodium quinoa AUR62009831 IDD11: Protein indeterminate-domain 11 C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0008s2116 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN scaffold_8 + View
Cucumis sativus L. CsaV3_1G012940 protein indeterminate-domain 2 chr1 - View
Daucus carota DCAR_018822 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv32764 GWHABJS00000010 - View
Durio zibethinus Duzib168G1581 NW_019168159.1 + View
Durio zibethinus Duzib150G0217 NW_019167882.1 + View
Erigeron canadensis ECA248G3624 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA238G4443 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.B02487 Chr02 + View
Eucalyptus grandis Eucgr.A01159 Chr01 + View
Eucalyptus grandis Eucgr.J00939 Chr10 - View
Erythranthe guttata Migut.D02202 scaffold_4 + View
Erythranthe guttata Migut.I01032 scaffold_9 - View
Eutrema salsugineum Thhalv10002526m.g PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED scaffold_4 + View
Eutrema salsugineum Thhalv10016023m.g PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN scaffold_2 - View
Fragaria x ananassa FAN25G3646 PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW Fvb3-1 + View
Fragaria x ananassa FAN16G0493 PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW Fvb3-3 - View
Fragaria x ananassa FAN21G0099 PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW Fvb3-2 - View
Fragaria x ananassa FAN14G4299 PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW Fvb6-1 - View
Fragaria x ananassa FAN11G1839 PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW Fvb3-4 + View
Fragaria vesca FvH4_3g32700 PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW Fvb3 - View
Gossypium hirsutum Gohir.A09G106700 PTHR10593//PTHR10593:SF42 - SERINE/THREONINE-PROTEIN KINASE RIO // ZINC FINGER PROTEIN JACKDAW A09 + View
Glycine max Glyma.13G349500 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Gm13 + View
Glycine max Glyma.12G070300 PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm12 - View
Glycine max Glyma.11G155677 PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm11 + View
Glycine max Glyma.13G327500 PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm13 - View
Gossypium raimondii Gorai.006G120000 Chr06 - View
Helianthus annuus HanXRQChr01g0018281 Putative zinc finger, C2H2-like; Zinc finger, double-stranded RNA binding HanXRQChr01 + View
Helianthus annuus HanXRQChr14g0452961 Probable indeterminate(ID)-domain 7 HanXRQChr14 + View
Lupinus albus Lalb_Chr19g0137351 KOG3576 - Ovo and related transcription factors Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0004231 PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lalb_Chr01 + View
Lotus japonicus Lj3g0022046 PTHR10593//PTHR10593:SF24 - SERINE/THREONINE-PROTEIN KINASE RIO // INDETERMINATE(ID)-DOMAIN 7 PROTEIN chr3 + View
Lotus japonicus Lj3g0010732 PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj5A44T114 GWHAAZE00000005 + View
Lonicera japonica Lj2A1030T63 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_46760 PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_2_98240 PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_2_109221 PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_1_65581 PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW Lsat_1_v8_lg_1 - View
Malus domestica MD11G1133100 C2H2-like zinc finger protein Chr11 + View
Malus domestica MD04G1100300 C2H2-like zinc finger protein Chr04 - View
Manihot esculenta Manes.11G142900 Chromosome11 + View
Manihot esculenta Manes.04G140300 Chromosome04 - View
Manihot esculenta Manes.08G005700 Chromosome08 + View
Manihot esculenta Manes.11G025600 Chromosome11 + View
Manihot esculenta Manes.04G023700 Chromosome04 - View
Medicago truncatula Medtr2g099990 C2H2-type zinc finger protein chr2 + View
Medicago truncatula Medtr4g059870 C2H2 and C2HC zinc finger protein, putative chr4 - View
Medicago truncatula Medtr2g093960 C2H2-type zinc finger protein chr2 + View
Nelumbo nucifera Nn2g10748 chr2 + View
Nicotiana tabacum Nitab4.5_0000650g0060 Zinc finger, C2H2, Zinc finger, C2H2-like, Zinc finger C2H2-type/integrase DNA-binding domain Nitab4.5_0000650 + View
Petunia axillaris Peaxi162Scf00270g01116 C2H2-like zinc finger protein Peaxi162Scf00270 - View
Prunus persica Prupe.6G098800 PTHR10593:SF42 - ZINC FINGER PROTEIN JACKDAW Pp06 + View
Pisum sativum Psat7g224080 Zinc finger C2H2 type domain profile. chr7LG7 + View
Pisum sativum Psat5g277680 Zinc-finger double-stranded RNA-binding chr5LG3 + View
Papaver somniferum PSO339G1214 NC_039366.1 - View
Phaseolus vulgaris Phvul.005G136300 PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr05 - View
Phaseolus vulgaris Phvul.011G074100 PTHR10593//PTHR10593:SF51 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr11 + View
Phaseolus vulgaris Phvul.005G158600 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Chr05 + View
Quercus lobata QL01p022905 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0059771 RcHm_v2.0_Chr5 - View
Salvia bowleyana SalBow7G0643 GWHASIU00000005 - View
Simmondsia chinensis Sc15g0000200 GWHAASQ00000015 - View
Solanum lycopersicum Solyc11g069240.2 Protein indeterminate-domain 2 (AHRD V3.3 *** A0A2G3BBG6_CAPCH) SL4.0ch11 + View
Solanum lycopersicum Solyc03g121660.3 Protein indeterminate-domain 7 (AHRD V3.3 *** A0A2G2V8T0_CAPBA) SL4.0ch03 - View
Solanum lycopersicum Solyc09g007550.3 Protein indeterminate-domain 12 (AHRD V3.3 *** A0A2G2V7B7_CAPBA) SL4.0ch09 + View
Schrenkiella parvula Sp5g16040 PTHR10593//PTHR10593:SF45 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED ch5-1 + View
Schrenkiella parvula Sp6g22060 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN ch6-6 + View
Solanum pennellii Sopen11g027970 C2H2-like zinc finger protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein Spenn-ch11 + View
Solanum pennellii Sopen03g040470 MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. | Magpie (MGP) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein Spenn-ch03 - View
Solanum pennellii Sopen09g002420 JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect. | JACKDAW (JKD) | FUNCTIONS IN: protein binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of epidermal cell differentiation, regulation of meristem growth, regulation of cell division, root development, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 6 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400008110 Nucleic acid binding protein ST4.03ch11 + View
Trochodendron aralioides TAR633G0506 group2 - View
Trochodendron aralioides TAR369G0993 group18 + View
Trochodendron aralioides TAR623G1421 group7 + View
Theobroma cacao Thecc.09G257800 Nucleic acid binding protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104799497 protein indeterminate-domain 9 NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104814834 protein indeterminate-domain 9-like NW_010965541.1 - View
Trifolium pratense TPR.G11554 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G15534 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI79G1702 NC_052238.1 + View
Tripterygium wilfordii TWI75G1376 NC_052253.1 + View
Utricularia gibba unitig_899.g14910 unitig_899 + View
Vigna mungo VMungo1080G0625 CM024079.1 + View
Vigna mungo VMungo1127G0358 CM024076.1 + View
Vigna mungo VMungo1383G0655 CM024070.1 + View
Vitis vinifera GSVIVG01025166001 chr6 - View