Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold173G39121 scaffold173 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G6840 LG-6 - View
Acer truncatum Atru.chr9.2092 chr9 + View
Actinidia chinensis Actinidia28332 Lachesis_group23 + View
Actinidia chinensis Actinidia04227 Lachesis_group6 + View
Arabidopsis lyrata AL7G29750 scaffold_7 + View
Arabidopsis thaliana AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain%3B FUNCTIONS IN: cobalt ion binding%2C zinc ion binding%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C intracellular%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L25%2C N-terminal (InterPro:IPR020055)%2C Ribosomal protein L25 (InterPro:IPR001021)%2C Ribosomal protein L25%2C beta domain (InterPro:IPR020057)%2C Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain (InterPro:IPR011035)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase%2C anti-codon-binding domain (TAIR:AT5G66860.1)%3B Has 3887 Blast hits to 3887 proteins in 1083 species: Archae - 0%3B Bacteria - 2293%3B Metazoa - 0%3B Fungi - 0%3B Plants - 72%3B Viruses - 0%3B Other Eukaryotes - 1522 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung01070 Contig456 - View
Brassica napus A01p14920 A01 - View
Brassica rapa BraA01t01433Z A01 - View
Beta vulgaris EL10Ac5g12848 K02897 - large subunit ribosomal protein L25 (RP-L25, rplY) Chr5_EL10_PGA_scaffold2 - View
Coffea canephora Cc08_g15430 Putative 50S ribosomal protein L25 chr8 - View
Ceratophyllum demersum CDE10G0677 8 + View
Cardamine hirsuta CARHR230980 50S ribosomal protein L25, putative Chr7 - View
Capsella rubella Carub.0007s1752 PTHR33284//PTHR33284:SF1 - FAMILY NOT NAMED // RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN scaffold_7 + View
Durio zibethinus Duzib068G0591 NW_019167838.1 - View
Eucalyptus grandis Eucgr.D01799 Chr04 + View
Erythranthe guttata Migut.A00704 scaffold_1 + View
Eutrema salsugineum Thhalv10026041m.g PTHR33284:SF1 - RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN scaffold_1 + View
Punica granatum PGR031G0557 NC_045127.1 - View
Populus trichocarpa Potri.001G097801 PTHR33284//PTHR33284:SF1 - FAMILY NOT NAMED // RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Chr01 + View
Rhododendron simsii Rhsim07G0086400 chr07 + View
Salix brachista Sabra01G0073200 GWHAAZH00000001 + View
Simmondsia chinensis Sc22g0005280 GWHAASQ00000022 + View
Schrenkiella parvula Sp7g21540 PTHR33284:SF1 - RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN ch7-4 - View
Tarenaya hassleriana THA.LOC104806423 uncharacterized protein LOC104806423 NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104814787 uncharacterized protein LOC104814787 NW_010960187.1 - View
Utricularia gibba unitig_748.g7423 unitig_748 + View
Vaccinium macrocarpon vmacro13985 Similar to rplY: 50S ribosomal protein L25 (Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX%3D402881) chr7_Vaccinium_macrocarpon_Stevens_v1 + View