Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G15260 LG-10 + View
Aethionema arabicum Aa31LG1G27210 LG-1 + View
Acer truncatum Atru.chr5.423 chr5 + View
Actinidia chinensis Actinidia33436 Lachesis_group16 + View
Actinidia chinensis Actinidia12719 Lachesis_group23 + View
Arabidopsis lyrata AL4G44950 scaffold_4 + View
Arabidopsis lyrata AL5G43430 scaffold_5 + View
Avicennia marina MSTRG.17241 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.28208 ScioBoG_94932_HRSCAF_95134 + View
Avicennia marina MSTRG.20805 ScioBoG_26180_HRSCAF_26306 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NP1K2X PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8F7VI8 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT4G11680 Zinc finger, C3HC4 type (RING finger) family protein Zinc finger%2C C3HC4 type (RING finger) family protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: Zinc finger%2C C3HC4 type (RING finger) family protein (TAIR:AT1G12760.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT3G61180 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: Zinc finger%2C C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1)%3B Has 9287 Blast hits to 9262 proteins in 268 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2550%3B Fungi - 691%3B Plants - 4858%3B Viruses - 35%3B Other Eukaryotes - 1147 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC02g12185 ChrC02 - View
Brassica carinata BcaB02g09012 ChrB02 - View
Brassica carinata BcaC07g42660 ChrC07 + View
Brassica carinata BcaC02g07050 ChrC02 + View
Brassica carinata BcaC07g40623 ChrC07 + View
Brassica napus A04p01240 A04 - View
Brassica napus A05p05750 A05 + View
Brassica napus C08p36060 C08 + View
Brassica napus A09p53250 A09 + View
Brassica napus C04p06680 C04 + View
Brassica oleracea BolC4t22290H C4 + View
Brassica oleracea BolC8t51186H C8 + View
Brassica rapa BraA09t40750Z A09 + View
Brassica rapa BraA04t15843Z A04 - View
Camellia sinensis var. sinensis CSS0032938 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris] Chr6 + View
Camellia sinensis var. sinensis CSS0036091 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris] Chr3 - View
Capsicum annuum CAN.G170.21 PGAv.1.6.scaffold170 - View
Cannabis sativa CANSAT56G1484 NC_044371.1 - View
Cicer arietinum L. Ca_07853_v3 Ca_LG3_v3 - View
Corylus avellana Haze_15207 Similar to At4g11680: E3 ubiquitin-protein ligase At4g11680 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g37400 E3 ubiquitin-protein ligase At4g11680 chr2 + View
Citrus clementina Ciclev10020664m.g scaffold_3 - View
Ceratophyllum demersum CDE11G1159 9 + View
Carpinus fangiana Cfa004202 Cfa01 + View
Cardamine hirsuta CARHR141030 Ring finger protein, putative Chr4 + View
Cardamine hirsuta CARHR171490 Ring finger protein, putative Chr5 + View
Carya illinoinensis CiPaw.11G139700 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr11 - View
Carya illinoinensis CiPaw.01G055300 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr01 + View
Carya illinoinensis CiPaw.02G026600 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Citrullus lanatus ClCG05G001800 RING-H2 finger protein 2B LENGTH=147 CG_Chr05 - View
Cucumis melo MELO3C006140.2 E3 ubiquitin-protein ligase At1g63170 chr06 - View
Corchorus olitorius COL.COLO4_12609 Zinc finger%2C RING-type AWUE01014934.1 - View
Chenopodium quinoa AUR62004304 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_4250 + View
Chenopodium quinoa AUR62022754 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_1870 + View
Capsella rubella Carub.0004s2846 PTHR14155//PTHR14155:SF97 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_4 + View
Capsella rubella Carub.0006s3077 PTHR14155//PTHR14155:SF114 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_6 - View
Cucumis sativus L. CsaV3_3G009200 E3 ubiquitin-protein ligase chr3 - View
Daucus carota DCAR_008596 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_006912 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv32436 GWHABJS00000020 + View
Durio zibethinus Duzib068G1043 NW_019167838.1 + View
Durio zibethinus Duzib138G0549 NW_019167893.1 + View
Durio zibethinus Duzib133G0664 NW_019167938.1 + View
Erigeron canadensis ECA236G5145 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.D02250 Chr04 + View
Erythranthe guttata Migut.B01705 scaffold_2 + View
Erythranthe guttata Migut.N01422 scaffold_14 + View
Eutrema salsugineum Thhalv10006041m.g PTHR14155//PTHR14155:SF97 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_19 - View
Fragaria x ananassa FAN10G2118 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN06G0163 PTHR14155//PTHR14155:SF114 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria x ananassa FAN06G4661 PTHR14155//PTHR14155:SF114 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria x ananassa FAN10G3330 PTHR14155//PTHR14155:SF114 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN01G2515 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria vesca FvH4_7g13390 PTHR14155//PTHR14155:SF114 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7 + View
Gossypium hirsutum Gohir.A03G018201 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A03 + View
Gossypium hirsutum Gohir.D03G153400 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D03 - View
Gossypium hirsutum Gohir.A11G086100 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A11 + View
Gossypium hirsutum Gohir.A12G225700 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.D11G090300 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.D12G228200 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D12 + View
Glycine max Glyma.09G265600 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm09 + View
Glycine max Glyma.18G225500 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm18 - View
Gossypium raimondii Gorai.008G244300 Chr08 + View
Gossypium raimondii Gorai.007G096300 Chr07 + View
Helianthus annuus HanXRQChr06g0169761 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr06 + View
Helianthus annuus HanXRQChr04g0121921 Probable zinc finger, C3HC4 type (RING finger) family protein HanXRQChr04 + View
Hydrangea macrophylla Hma1.2p1_0033F.1_g020490 Hma1.2p1_0033F.1 - View
Lupinus albus Lalb_Chr05g0225011 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr05 - View
Lotus japonicus Lj1g0011084 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lj7A518T102 GWHAAZE00000007 - View
Lonicera japonica Lj9A578G59 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_7_5561 Lsat_1_v8_lg_7 - View
Magnolia biondii MBI12_g43908_MAGBIO AED:0.41 Chr12 + View
Malus domestica MD07G1126700 Zinc finger Chr07 - View
Malus domestica MD01G1049700 RING/U-box superfamily protein Chr01 - View
Manihot esculenta Manes.01G260900 Chromosome01 - View
Manihot esculenta Manes.02G025600 Chromosome02 - View
Medicago truncatula Medtr7g076010 RING zinc finger protein, putative chr7 - View
Nelumbo nucifera Nn1g01399 chr1 + View
Olea europaea Oeu056331.1 chr15 - View
Petunia axillaris Peaxi162Scf00021g01017 Zinc finger, C3HC4 type (RING finger) family protein Peaxi162Scf00021 + View
Punica granatum PGR031G0719 NC_045127.1 - View
Punica granatum PGR031G3582 NC_045127.1 + View
Prunus persica Prupe.2G157200 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Pp02 + View
Pisum sativum Psat3g112520 Zinc finger + C3HC4 RING-type chr3LG5 + View
Populus trichocarpa Potri.003G123300 PTHR14155//PTHR14155:SF186 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr03 + View
Populus trichocarpa Potri.014G075000 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr14 - View
Populus trichocarpa Potri.002G155200 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Phaseolus vulgaris Phvul.008G073000 PTHR14155//PTHR14155:SF140 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr08 + View
Quercus lobata QL08p050159 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0352711 RcHm_v2.0_Chr1 + View
Salix brachista Sabra03G0087000 GWHAAZH00000003 + View
Simmondsia chinensis Sc02g0002170 GWHAASQ00000002 - View
Simmondsia chinensis Sc23g0003180 GWHAASQ00000023 - View
Sechium edule Sed0028087 LG02 - View
Sechium edule Sed0017034 LG12 - View
Solanum lycopersicum Solyc01g091600.4 RING/U-box superfamily protein (AHRD V3.3 *** Q93YQ5_ARATH) SL4.0ch01 - View
Schrenkiella parvula Sp5g02190 PTHR14155//PTHR14155:SF97 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch5-1 - View
Schrenkiella parvula Sp4g27830 PTHR14155//PTHR14155:SF97 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch4-6 + View
Solanum pennellii Sopen01g037370 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400027772 Cleavage and polyadenylation specificity factor ST4.03ch01 - View
Selenicereus undatus Hund27314 Scaffold_2055 - View
Trochodendron aralioides TAR629G2473 group0 + View
Theobroma cacao Thecc.01G366200 RING/U-box superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104817275 E3 ubiquitin-protein ligase At4g11680 isoform X1 NW_010965946.1 + View
Tarenaya hassleriana THA.LOC104806376 E3 ubiquitin-protein ligase At4g11680 isoform X1 NW_010962392.1 + View
Tarenaya hassleriana THA.LOC104814349 E3 ubiquitin-protein ligase At4g11680-like isoform X1 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104818161 E3 ubiquitin-protein ligase At1g63170-like isoform X1 NW_010960187.1 - View
Trifolium pratense TPR.G37818 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI59G1217 NC_052248.1 + View
Tripterygium wilfordii TWI60G1317 NC_052246.1 + View
Utricularia gibba unitig_8.g3807 unitig_8 + View
Vaccinium macrocarpon vmacro13328 Similar to At1g12760: E3 ubiquitin-protein ligase At1g12760 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G3360 CM024074.1 - View
Vitis vinifera GSVIVG01027503001 chr15 + View