Gene: AT3G61180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G61180
  • Transcript Identifier AT3G61180.1
  • Gene Type Coding gene
  • Location Chr3 : 22645680-22647290 : positive

Gene Family Information

  • ID HOM05D000459
  • #Genes/#Species 1147/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G61180.1
  • uniprot Q93YQ5

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT4G11680.1); Has 9287 Blast hits to 9262 proteins in 268 species: Archae - 0; Bacteria - 6; Metazoa - 2550; Fungi - 691; Plants - 4858; Viruses - 35; Other Eukaryotes - 1147 (source: NCBI BLink).
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Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0000325
HDA
Gene Ontologyplant-type vacuole1
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005774
IBA
Gene Ontologyvacuolar membrane2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.7 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RIE1)