Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold25G10843 scaffold25 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G890 LG-11 + View
Acer truncatum Atru.chr9.2476 chr9 + View
Actinidia chinensis Actinidia19319 Lachesis_group1 - View
Actinidia chinensis Actinidia33067 Lachesis_group13 + View
Avicennia marina MSTRG.23128 ScioBoG_3703_HRSCAF_3719 + View
Avicennia marina MSTRG.11450 ScioBoG_14204_HRSCAF_14270 + View
Amaranthus hybridus Ah.11g051630 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (1-deoxyxylulose-5-phosphate reductoisomerase) (DXP reductoisomerase) (EC 1.1.1.267) (2-C-methyl-D-erythritol 4-phosphate synthase) AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy3G02948 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2KV8GB K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9FL7A6 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis%2C DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal%2C albino phenotype. Transgenic%2C partially silenced lines expressing 35S:DXR have a variegated phenotype. 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR)%3B FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity%3B INVOLVED IN: response to cadmium ion%2C response to light stimulus%2C isoprenoid biosynthetic process%2C isopentenyl diphosphate biosynthetic process%2C mevalonate-independent pathway%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C N-terminal (InterPro:IPR013512)%2C 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821)%2C 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C C-terminal (InterPro:IPR013644)%3B Has 6813 Blast hits to 6813 proteins in 2049 species: Archae - 0%3B Bacteria - 4206%3B Metazoa - 6%3B Fungi - 0%3B Plants - 109%3B Viruses - 0%3B Other Eukaryotes - 2492 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0730G147 AmTr_v1.0_scaffold00058 + View
Brassica carinata BcaC01g02522 ChrC01 - View
Brassica carinata BcaB02g09693 ChrB02 - View
Brassica napus A06p29560 A06 - View
Brassica napus C03p63940 C03 + View
Brassica oleracea BolC3t18648H C3 + View
Brassica rapa BraA06t25902Z A06 - View
Camellia sinensis var. sinensis CSS0045852 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Actinidia arguta] Chr15 - View
Capsicum annuum CAN.G781.11 PGAv.1.6.scaffold781 - View
Cicer arietinum L. Ca_21917_v3 Ca_LG7_v3 + View
Corylus avellana Haze_07469 Similar to DXR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (Oryza sativa subsp. japonica OX%3D39947) 4 + View
Coffea canephora Cc04_g14010 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic chr4 + View
Citrus clementina Ciclev10020004m.g scaffold_3 + View
Ceratophyllum demersum CDE07G0194 5 - View
Ceratophyllum demersum CDE06G1773 4 - View
Cardamine hirsuta CARHR276570 1-deoxy-D-xylulose-5-phosphate reductoisomerase Chr8 - View
Carya illinoinensis CiPaw.11G026400 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Chr11 - View
Citrullus lanatus ClCG06G017010 1-deoxy-D-xylulose-5-phosphate reductoisomerase CG_Chr06 + View
Cucumis melo MELO3C026292.2 1-deoxy-d-xylulose 5-phosphate reductoisomerase chr02 - View
Carica papaya Cpa.g.sc76.64 supercontig_76 - View
Chenopodium quinoa AUR62008212 DXR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic C_Quinoa_Scaffold_3422 - View
Chenopodium quinoa AUR62030965 DXR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic C_Quinoa_Scaffold_2689 - View
Capsella rubella Carub.0008s2351 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase scaffold_8 - View
Cucumis sativus L. CsaV3_1G001500 1-deoxy-D-xylulose 5-phosphate reductoisomerase chr1 - View
Daucus carota DCAR_026133 1-deoxy-D-xylulose 5-phosphate reductoisomerase DCARv2_Chr7 + View
Davidia involucrata Dinv02897 GWHABJS00000019 - View
Davidia involucrata Dinv20656 GWHABJS00000006 + View
Durio zibethinus Duzib068G0560 NW_019167838.1 - View
Durio zibethinus Duzib205G1198 NW_019168381.1 - View
Erigeron canadensis ECA232G0993 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.B00316 Chr02 - View
Erythranthe guttata Migut.I00013 scaffold_9 - View
Eutrema salsugineum Thhalv10004122m.g 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase scaffold_6 + View
Fragaria x ananassa FAN18G3061 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Fvb5-1 + View
Fragaria x ananassa FAN08G0480 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Fvb5-3 - View
Fragaria x ananassa FAN18G3775 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Fvb5-1 - View
Fragaria x ananassa FAN04G2056 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Fvb5-4 + View
Fragaria x ananassa FAN13G0153 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Fvb5-2 + View
Fragaria vesca FvH4_5g05300 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Fvb5 + View
Glycine max Glyma.05G037500 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Gm05 + View
Glycine max Glyma.17G089600 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Gm17 - View
Helianthus annuus HanXRQChr09g0272201 Probable 1-deoxy-D-xylulose 5-phosphate reductoisomerase HanXRQChr09 - View
Lupinus albus Lalb_Chr07g0182731 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Lalb_Chr07 + View
Lupinus albus Lalb_Chr13g0297811 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Lalb_Chr13 - View
Lupinus albus Lalb_Chr12g0201571 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Lalb_Chr12 + View
Lotus japonicus Lj4g0012807 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) chr4 + View
Lonicera japonica Lj9A449G48 GWHAAZE00000009 - View
Lonicera japonica Lj5A124T67 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_14440 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_4_75261 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Lsat_1_v8_lg_4 + View
Magnolia biondii MBI10_g14554_MAGBIO AED:0.21 Chr10 - View
Magnolia biondii MBI16_g32207_MAGBIO AED:0.10 Chr16 - View
Malus domestica MD14G1180500 1-deoxy-D-xylulose 5-phosphate reductoisomerase Chr14 - View
Malus domestica MD06G1174000 1-deoxy-D-xylulose 5-phosphate reductoisomerase Chr06 - View
Manihot esculenta Manes.14G065900 Chromosome14 - View
Manihot esculenta Manes.06G104700 Chromosome06 + View
Medicago truncatula Medtr4g106870 1-deoxy-D-xylulose 5-phosphate reductoisomerase chr4 - View
Nelumbo nucifera Nn4g22770 chr4 - View
Olea europaea Oeu040829.1 chr10 + View
Olea europaea Oeu035988.1 scaffold307 + View
Petunia axillaris Peaxi162Scf00017g02915 1-deoxy-D-xylulose 5-phosphate reductoisomerase Peaxi162Scf00017 + View
Punica granatum PGR083G1520 NC_045133.1 + View
Prunus persica Prupe.5G174000 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Pp05 - View
Pisum sativum Psat4g058000 1-deoxy-D-xylulose 5-phosphate reductoisomerase chr4LG4 + View
Populus trichocarpa Potri.012G080900 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Chr12 + View
Populus trichocarpa Potri.015G076200 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Chr15 + View
Phaseolus vulgaris Phvul.003G200300 K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Chr03 + View
Quercus lobata QL10p011706 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0193571 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0171900 chr08 + View
Salvia bowleyana SalBow5G5681 GWHASIU00000003 - View
Salix brachista Sabra15G0101400 GWHAAZH00000015 + View
Salix brachista Sabra12G0057700 GWHAAZH00000012 + View
Simmondsia chinensis Sc12g0005330 GWHAASQ00000012 - View
Sechium edule Sed0001158 LG08 - View
Solanum lycopersicum Solyc03g114340.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase SL4.0ch03 + View
Schrenkiella parvula Sp2g25950 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase ch2-4 - View
Solanum pennellii Sopen03g033440 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice), 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) | CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal , 1-deoxy-D-xylulose 5-phosphate reductoisomerase , 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal ., NAD(P)-binding domain Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400024503 1-deoxy-D-xylulose-5-phosphate reductoisomerase ST4.03ch03 + View
Selenicereus undatus Hund09436 Scaffold_10417 + View
Trochodendron aralioides TAR629G0089 group0 + View
Trochodendron aralioides TAR622G0131 group8 + View
Theobroma cacao Thecc.03G012400 1-deoxy-D-xylulose 5-phosphate reductoisomerase Chromosome_3 + View
Tarenaya hassleriana THA.LOC104818235 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C chloroplastic NW_010966092.1 + View
Trifolium pratense TPR.G37486 Tp57577_TGAC_v2_LG5 - View
Utricularia gibba unitig_0.g1445 unitig_0 - View
Vaccinium macrocarpon vmacro19385 Similar to DXR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (Oryza sativa subsp. japonica OX%3D39947) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2328 CM024074.1 - View