Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2478 chr9 - View
Acer truncatum Atru.chr11.2038 chr11 - View
Actinidia chinensis Actinidia19321 Lachesis_group1 + View
Actinidia chinensis Actinidia01703 Lachesis_group10 + View
Actinidia chinensis Actinidia19097 Lachesis_group9 - View
Actinidia chinensis Actinidia33069 Lachesis_group13 - View
Arabidopsis lyrata AL2G29810 scaffold_2 - View
Avicennia marina MSTRG.590 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.11452 ScioBoG_14204_HRSCAF_14270 - View
Aquilegia oxysepala Aqoxy3G01040 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HH247V PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V0ST4M PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT1G70440 similar to RCD one 3 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. similar to RCD one 3 (SRO3)%3B FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity%3B INVOLVED IN: biological_process unknown%3B CONTAINS InterPro DOMAIN/s: RST domain of plant C-terminal (InterPro:IPR022003)%2C Poly(ADP-ribose) polymerase%2C catalytic domain (InterPro:IPR012317)%3B BEST Arabidopsis thaliana protein match is: similar to RCD one 2 (TAIR:AT1G23550.1)%3B Has 176 Blast hits to 165 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 14%3B Fungi - 0%3B Plants - 161%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0730G191 AmTr_v1.0_scaffold00058 - View
Brassica carinata BcaC08g46487 ChrC08 - View
Brassica rapa BraA07t31248Z A07 - View
Beta vulgaris EL10Ac5g10744 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0017926 hypothetical protein PRUPE_ppa007712mg [Prunus persica] Chr15 + View
Capsicum annuum CAN.G781.8 PGAv.1.6.scaffold781 + View
Cicer arietinum L. Ca_16178_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_21919_v3 Ca_LG7_v3 - View
Corylus avellana Haze_12186 Similar to SRO2: Probable inactive poly polymerase SRO2 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_07472 Similar to SRO5: Probable inactive poly polymerase SRO5 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc04_g14100 Putative Probable inactive poly [ADP-ribose] polymerase SRO5 chr4 - View
Citrus clementina Ciclev10032827m.g scaffold_4 + View
Citrus clementina Ciclev10020868m.g scaffold_3 - View
Carpinus fangiana Cfa009153 Cfa03 - View
Cardamine hirsuta CARHR063610 similar to RCD one 3 Chr2 - View
Carya illinoinensis CiPaw.06G071500 PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED Chr06 + View
Carya illinoinensis CiPaw.12G026600 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr12 - View
Carya illinoinensis CiPaw.11G026200 PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr11 + View
Cucumis melo MELO3C002263.2 Poly polymerase Poly [ADP-ribose] polymerase chr12 + View
Chenopodium quinoa AUR62008209 SRO5: Probable inactive poly [ADP-ribose] polymerase SRO5 C_Quinoa_Scaffold_3422 + View
Chenopodium quinoa AUR62030961 SRO4: Probable inactive poly [ADP-ribose] polymerase SRO4 C_Quinoa_Scaffold_2689 + View
Capsella rubella Carub.0002s1713 PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_1G008470 Poly [ADP-ribose] polymerase chr1 - View
Daucus carota DCAR_026135 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv20653 GWHABJS00000006 - View
Durio zibethinus Duzib205G2052 NW_019168381.1 + View
Erigeron canadensis ECA232G4399 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G4166 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B00305 Chr02 + View
Erythranthe guttata Migut.D01931 scaffold_4 - View
Eutrema salsugineum Thhalv10019788m.g PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED scaffold_9 + View
Fragaria x ananassa FAN04G1163 PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Fvb5-4 - View
Fragaria x ananassa FAN18G1054 Fvb5-1 - View
Fragaria x ananassa FAN12G1661 PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED Fvb4-3 + View
Fragaria x ananassa FAN17G1730 PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED Fvb4-2 - View
Fragaria x ananassa FAN13G2823 Fvb5-2 - View
Fragaria x ananassa FAN22G0184 PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED Fvb4-1 + View
Fragaria x ananassa FAN18G0809 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Fvb5-1 + View
Fragaria x ananassa FAN08G1864 PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Fvb5-3 + View
Fragaria vesca FvH4_5g05320 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Fvb5 - View
Glycine max Glyma.04G183100 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Gm04 + View
Glycine max Glyma.05G037700 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Gm05 - View
Glycine max Glyma.17G089400 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Gm17 + View
Helianthus annuus HanXRQChr09g0272181 Probable similar to RCD one 3 HanXRQChr09 + View
Lupinus albus Lalb_Chr12g0201581 PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Lalb_Chr12 - View
Lotus japonicus Lj1g0007843 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED chr1 - View
Lotus japonicus Lj4g0011780 PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED chr4 - View
Lonicera japonica Lj5A124T71 GWHAAZE00000005 - View
Lonicera japonica Lj9A449T43 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_75180 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Lsat_1_v8_lg_4 - View
Magnolia biondii MBI16_g27099_MAGBIO AED:0.11 Chr16 + View
Malus domestica MD06G1173800 similar to RCD one 5 Chr06 + View
Malus domestica MD13G1092800 similar to RCD one 2 Chr13 - View
Malus domestica MD14G1180300 similar to RCD one 5 Chr14 + View
Manihot esculenta Manes.14G065700 Chromosome14 + View
Manihot esculenta Manes.12G028100 Chromosome12 + View
Manihot esculenta Manes.06G104901 Chromosome06 - View
Manihot esculenta Manes.13G029600 Chromosome13 + View
Medicago truncatula Medtr3g077870 inactive poly [ADP-ribose] polymerase SRO4 chr3 + View
Medicago truncatula Medtr4g105740 inactive poly [ADP-ribose] polymerase SRO4 chr4 + View
Nelumbo nucifera Nn3g16865 chr3 - View
Olea europaea Oeu035991.1 scaffold307 - View
Olea europaea Oeu016384.1 chr18 + View
Petunia axillaris Peaxi162Scf00017g03031 RCD one 5, putative isoform 1 Peaxi162Scf00017 - View
Punica granatum PGR083G1086 NC_045133.1 - View
Prunus persica Prupe.5G173700 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Pp05 + View
Prunus persica Prupe.1G252800 PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED Pp01 + View
Pisum sativum Psat5g114720 RCD1-SRO-TAF4 (RST) plant domain chr5LG3 - View
Pisum sativum Psat4g058080 RCD1-SRO-TAF4 (RST) plant domain chr4LG4 - View
Populus trichocarpa Potri.015G076500 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr15 - View
Populus trichocarpa Potri.012G081100 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr12 - View
Phaseolus vulgaris Phvul.003G200500 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr03 - View
Phaseolus vulgaris Phvul.009G178500 PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED Chr09 + View
Rosa chinensis RcHm_v2.0_Chr7g0193541 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim12G0164600 chr12 - View
Rhododendron simsii Rhsim12G0044600 chr12 + View
Rhododendron simsii Rhsim08G0172100 chr08 - View
Salvia bowleyana SalBow2G2071 GWHASIU00000007 + View
Salix brachista Sabra12G0058000 GWHAAZH00000012 - View
Salix brachista Sabra15G0101600 GWHAAZH00000015 - View
Simmondsia chinensis Sc12g0005320 GWHAASQ00000012 + View
Sechium edule Sed0010568 LG01 - View
Sechium edule Sed0012184 LG08 - View
Solanum lycopersicum Solyc03g114360.4 Poly polymerase (AHRD V3.3 *** A0A2I4EPD4_9ROSI) SL4.0ch03 - View
Schrenkiella parvula Sp5g25520 PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATED ch5-6 - View
Solanum pennellii Sopen03g033460 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. | similar to RCD one 5 (SRO5) | FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity | INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain | BEST Arabidopsis thaliana protein match is: similar to RCD one 4 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400024600 Conserved gene of unknown function ST4.03ch03 - View
Trochodendron aralioides TAR629G2674 group0 - View
Trochodendron aralioides TAR374G0978 group12 - View
Trochodendron aralioides TAR622G1404 group8 - View
Trochodendron aralioides TAR371G0407 group13 + View
Theobroma cacao Thecc.03G012700 RCD one 5 Chromosome_3 - View
Theobroma cacao Thecc.02G251100 RCD one 2 Chromosome_2 - View
Trifolium pratense TPR.G37574 Tp57577_TGAC_v2_LG5 + View
Vaccinium macrocarpon vmacro19387 Similar to SRO5: Probable inactive poly polymerase SRO5 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16609 Similar to SRO5: Probable inactive poly polymerase SRO5 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1575 CM024072.1 - View
Vigna mungo VMungo1215G1374 CM024074.1 + View
Vitis vinifera GSVIVG01007754001 chr17 + View