Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold7G03868 scaffold7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G8960 LG-2 + View
Acer truncatum Atru.chr10.2185 chr10 - View
Arabidopsis lyrata AL2G14180 scaffold_2 + View
Avicennia marina MSTRG.7228 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.14642 ScioBoG_18782_HRSCAF_18867 + View
Amaranthus hybridus Ah.14g088070 AmaHy_arrow1_Scaffold_14 + View
Aquilegia oxysepala Aqoxy1G03283 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.13GHM6 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT1G61870 pentatricopeptide repeat 336 pentatricopeptide repeat 336 (PPR336)%3B LOCATED IN: mitochondrion%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G11630.1)%3B Has 31000 Blast hits to 9550 proteins in 270 species: Archae - 4%3B Bacteria - 23%3B Metazoa - 297%3B Fungi - 351%3B Plants - 29494%3B Viruses - 0%3B Other Eukaryotes - 831 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC04g22358 ChrC04 - View
Brassica carinata BcaC05g25031 ChrC05 - View
Brassica carinata BcaC06g31872 ChrC06 - View
Brassica napus C04p27830 C04 - View
Brassica napus C05p09760 C05 - View
Brassica napus A06p08200 A06 - View
Brassica oleracea BolC4t24326H C4 - View
Brassica oleracea BolC5t29717H C5 - View
Camellia sinensis var. sinensis CSS0036990 PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Vitis vinifera] Chr8 + View
Capsicum annuum CAN.G105.16 PGAv.1.6.scaffold105 + View
Cannabis sativa CANSAT56G0821 NC_044371.1 + View
Corylus avellana Haze_06789 Similar to PPR336: Pentatricopeptide repeat-containing protein At1g61870, mitochondrial (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc09_g01890 Pentatricopeptide repeat-containing protein At1g61870, mitochondrial chr9 + View
Citrus clementina Ciclev10015461m.g scaffold_2 + View
Ceratophyllum demersum CDE02G2552 1 + View
Carpinus fangiana Cfa000246 Cfa01 + View
Cardamine hirsuta CARHR050450 pentatricopeptide repeat 336 Chr2 + View
Carya illinoinensis CiPaw.10G069600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr10 - View
Citrullus lanatus ClCG03G004860 pentatricopeptide repeat 336 LENGTH=408 CG_Chr03 + View
Carica papaya Cpa.g.sc198.30 supercontig_198 - View
Capsella rubella Carub.0002s0317 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_2 + View
Cucumis sativus L. CsaV3_1G010890 pentatricopeptide repeat-containing protein At1g61870, mitochondrial chr1 + View
Daucus carota DCAR_004206 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv13875 GWHABJS00000016 - View
Durio zibethinus Duzib235G0743 NW_019167982.1 - View
Eucalyptus grandis Eucgr.E04085 Chr05 + View
Erythranthe guttata Migut.H01561 scaffold_8 - View
Erythranthe guttata Migut.M01300 scaffold_13 - View
Eutrema salsugineum Thhalv10023498m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 + View
Eutrema salsugineum Thhalv10007792m.g PF13041 - PPR repeat family (PPR_2) scaffold_5 + View
Fragaria x ananassa FAN21G0068 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-2 - View
Fragaria x ananassa FAN25G3562 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-1 - View
Fragaria vesca FvH4_3g02370 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3 + View
Gossypium hirsutum Gohir.A10G013900 A10 + View
Gossypium hirsutum Gohir.D10G013900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D10 + View
Glycine max Glyma.15G106500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm15 - View
Gossypium raimondii Gorai.011G015700 Chr11 + View
Lupinus albus Lalb_Chr15g0087451 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr15 - View
Lupinus albus Lalb_Chr18g0056251 PF13041 - PPR repeat family (PPR_2) Lalb_Chr18 - View
Lotus japonicus Lj6g0026353 PF13041 - PPR repeat family (PPR_2) chr6 - View
Lonicera japonica Lj1P1228T67 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_17421 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_4_60040 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lsat_1_v8_lg_4 - View
Malus domestica MD10G1318400 pentatricopeptide repeat 336 Chr10 - View
Malus domestica MD05G1343300 pentatricopeptide repeat 336 Chr05 - View
Manihot esculenta Manes.16G009800 Chromosome16 + View
Punica granatum PGR042G1315 NC_045130.1 + View
Prunus persica Prupe.4G023500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp04 + View
Populus trichocarpa Potri.011G001100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 + View
Phaseolus vulgaris Phvul.006G150800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr06 + View
Quercus lobata QL05p074007 5 + View
Rosa chinensis RcHm_v2.0_Chr5g0003601 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0156100 chr13 - View
Salvia bowleyana SalBow8G1993 GWHASIU00000004 + View
Salix brachista Sabra04G0009800 GWHAAZH00000004 - View
Salix brachista Sabra11G0019500 GWHAAZH00000011 - View
Simmondsia chinensis Sc05g0009060 GWHAASQ00000005 - View
Sechium edule Sed0018063 LG08 - View
Sechium edule Sed0025901 LG01 - View
Schrenkiella parvula Sp2g02670 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-2 + View
Solanum tuberosum PGSC0003DMG400011285 Pentatricopeptide repeat-containing protein ST4.03ch10 + View
Selenicereus undatus Hund21396 Scaffold_33680 - View
Selenicereus undatus Hund23485 Scaffold_3410 + View
Theobroma cacao Thecc.06G217800 Pentatricopeptide repeat 336 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104809510 pentatricopeptide repeat-containing protein At1g61870%2C mitochondrial NW_010965019.1 + View
Tripterygium wilfordii TWI38G0441 NC_052252.1 + View
Tripterygium wilfordii TWI63G1417 NC_052240.1 + View
Vigna mungo VMungo0540G1743 CM024075.1 - View