Gene: AT1G61870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G61870
  • Transcript Identifier AT1G61870.1
  • Gene Type Coding gene
  • Location Chr1 : 22865326-22866552 : negative

Gene Family Information

  • ID HOM05D000891
  • #Genes/#Species 672/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G61870.1
  • symbol PPR336
  • uniprot Q8LE47

Descriptions

  • Description pentatricopeptide repeat 336
  • Computational description pentatricopeptide repeat 336 (PPR336); LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G11630.1); Has 31000 Blast hits to 9550 proteins in 270 species: Archae - 4; Bacteria - 23; Metazoa - 297; Fungi - 351; Plants - 29494; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
IEA
GOA Databasemitochondrion
GO:0005739
HDA
ISM, IBA
Gene Ontologymitochondrion1 2
GO:0005743
IEA
GOA Databasemitochondrial inner membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
17.7.1.3.2 Protein biosynthesis.organelle machinery.mitochondrial ribosome.mitochondrial ribosome-associated proteins.regulatory protein (PPR336)