Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold96G29109 scaffold96 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G15770 LG-9 - View
Actinidia chinensis Actinidia32793 Lachesis_group14 - View
Actinidia chinensis Actinidia01247 Lachesis_group18 + View
Arabidopsis lyrata AL1G45800 scaffold_1 + View
Avicennia marina MSTRG.25749 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.11858 ScioBoG_17730_HRSCAF_17811 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C95Z0S K12400 - AP-4 complex subunit epsilon-1 (AP4E1) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HVM0CV K12400 - AP-4 complex subunit epsilon-1 (AP4E1) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT1G31730 Adaptin family protein Adaptin family protein%3B FUNCTIONS IN: clathrin binding%2C binding%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: membrane coat%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989)%2C Adaptor protein complex AP-4%2C epsilon subunit (InterPro:IPR017109)%2C Armadillo-type fold (InterPro:IPR016024)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%3B BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1%2C gamma subunit (TAIR:AT1G60070.1)%3B Has 4728 Blast hits to 3440 proteins in 365 species: Archae - 0%3B Bacteria - 98%3B Metazoa - 1563%3B Fungi - 860%3B Plants - 412%3B Viruses - 3%3B Other Eukaryotes - 1792 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g27184 ChrC05 + View
Brassica napus C05p30850 C05 + View
Brassica napus A09p34650 A09 - View
Brassica rapa BraA09t38999Z A09 - View
Cicer arietinum L. Ca_22458_v3 Ca_LG7_v3 - View
Coffea canephora Cc08_g05960 AP-4 complex subunit epsilon chr8 - View
Carpinus fangiana Cfa012306 Cfa05 - View
Cardamine hirsuta CARHR031030 AP-1 complex subunit gamma-2, putative Chr1 + View
Carya illinoinensis CiPaw.11G074100 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Chr11 + View
Capsella rubella Carub.0001s3003 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) scaffold_1 + View
Davidia involucrata Dinv37432 GWHABJS00000017 - View
Durio zibethinus Duzib205G0211 NW_019168381.1 + View
Durio zibethinus Duzib068G0752 NW_019167838.1 + View
Erigeron canadensis ECA240G1531 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.E01151 Chr05 - View
Eutrema salsugineum Thhalv10006719m.g K12400 - AP-4 complex subunit epsilon-1 (AP4E1) scaffold_5 - View
Fragaria x ananassa FAN08G3498 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Fvb5-3 - View
Gossypium hirsutum Gohir.D12G203900 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) D12 + View
Gossypium hirsutum Gohir.D08G169800 KOG1062 - Vesicle coat complex AP-1, gamma subunit D08 + View
Gossypium hirsutum Gohir.A08G148700 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) A08 + View
Gossypium hirsutum Gohir.A12G201100 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) A12 + View
Glycine max Glyma.01G153200 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Gm01 + View
Gossypium raimondii Gorai.008G218700 Chr08 + View
Gossypium raimondii Gorai.004G177000 Chr04 + View
Lupinus albus Lalb_Chr16g0380421 Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0325031 Lalb_Chr09 - View
Lupinus albus Lalb_Chr05g0215171 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Lalb_Chr05 - View
Lotus japonicus Lj4g0001871 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) chr4 + View
Medicago truncatula Medtr8g072250 AP-4 complex subunit epsilon chr8 + View
Olea europaea Oeu046773.1 chr8 - View
Punica granatum PGR031G1573 NC_045127.1 - View
Populus trichocarpa Potri.004G235200 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Chr04 + View
Phaseolus vulgaris Phvul.002G122300 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) Chr02 - View
Quercus lobata QL12p003602 12 + View
Rhododendron simsii Rhsim11G0037600 chr11 - View
Salvia bowleyana SalBow4G0955 GWHASIU00000008 + View
Solanum lycopersicum Solyc08g075310.4 AP-4 complex subunit epsilon (AHRD V3.3 *** A0A2G3C072_CAPCH) SL4.0ch08 + View
Schrenkiella parvula Sp1g27400 K12400 - AP-4 complex subunit epsilon-1 (AP4E1) ch1-1 + View
Solanum pennellii Sopen08g023910 Adaptin family protein | FUNCTIONS IN: clathrin binding, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Adaptor protein complex AP-4, epsilon subunit , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, N-terminal | BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400001953 AP-1 complex subunit gamma-2 ST4.03ch08 + View
Theobroma cacao Thecc.03G320400 Adaptin family protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104798531 AP-4 complex subunit epsilon-like NW_010968045.1 - View
Tripterygium wilfordii TWI60G0350 NC_052246.1 + View
Tripterygium wilfordii TWI32G0464 NC_052254.1 - View
Vaccinium macrocarpon vmacro00098 Similar to At1g31730: AP-4 complex subunit epsilon (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3448 CM024074.1 - View
Vitis vinifera GSVIVG01036887001 chr2 + View