Gene: Sopen08g023910
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g023910
- Transcript Identifier Sopen08g023910.2
- Gene Type Coding gene
- Location Spenn-ch08 : 63679972-63695684 : positive
Gene Family Information
- ID HOM05D000929
- #Genes/#Species 648/100
- Phylogenetic origin
- ID ORTHO05D004813
- #Genes/#Species 170/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g023910.2
Descriptions
- Description Adaptin family protein | FUNCTIONS IN: clathrin binding, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Adaptor protein complex AP-4, epsilon subunit , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, N-terminal | BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IEA | InterPro | protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030124 | IEA | InterPro | AP-4 adaptor complex | |
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G31730 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G31730 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.1.5.1 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-4 vacuole cargo adaptor complex.large subunit epsilon (AP4E) |