Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold114G31904 scaffold114 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G16320 LG-4 - View
Actinidia chinensis Actinidia37613 Lachesis_group13 + View
Actinidia chinensis Actinidia19023 Lachesis_group9 + View
Arabidopsis lyrata AL5G26770 scaffold_5 - View
Amaranthus hybridus Ah.02g113560 Pentatricopeptide repeat-containing protein At3g47530 AmaHy_arrow1_Scaffold_2 + View
Arabidopsis thaliana AT3G47530 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 30892 Blast hits to 13336 proteins in 235 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 50%3B Fungi - 60%3B Plants - 30406%3B Viruses - 0%3B Other Eukaryotes - 376 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G74400 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 30893 Blast hits to 12576 proteins in 195 species: Archae - 0%3B Bacteria - 17%3B Metazoa - 10%3B Fungi - 48%3B Plants - 30449%3B Viruses - 0%3B Other Eukaryotes - 369 (source: NCBI BLink). Chr1 + View
Brassica oleracea BolC6t39904H C6 - View
Capsicum annuum CAN.G628.10 PGAv.1.6.scaffold628 + View
Cicer arietinum L. Ca_21807_v3 Ca_LG7_v3 - View
Cardamine hirsuta CARHR156170 Pentatricopeptide repeat-containing protein Chr5 - View
Citrullus lanatus ClCG01G014660 Pentatricopeptide repeat protein 78 CG_Chr01 - View
Citrullus lanatus ClCG04G012100 Pentatricopeptide repeat-containing protein CG_Chr04 - View
Cucumis sativus L. CsaV3_3G041380 ribonuclease MC-like chr3 - View
Cucumis sativus L. CsaV3_1G002340 Pentatricopeptide repeat-containing protein chr1 + View
Daucus carota DCAR_012660 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_026046 hypothetical protein DCARv2_Chr7 + View
Durio zibethinus Duzib205G0661 NW_019168381.1 + View
Erigeron canadensis ECA247G2265 Conyza_canadensis_scaffold:7 + View
Erythranthe guttata Migut.D01808 scaffold_4 + View
Eutrema salsugineum Thhalv10018254m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_9 - View
Eutrema salsugineum Thhalv10010230m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_16 + View
Fragaria x ananassa FAN13G2910 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-2 - View
Fragaria x ananassa FAN18G1067 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-1 - View
Fragaria vesca FvH4_5g14600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5 - View
Gossypium hirsutum Gohir.D07G206300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D07 - View
Gossypium hirsutum Gohir.A07G199900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A07 - View
Glycine max Glyma.06G196000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 - View
Glycine max Glyma.05G026400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm05 - View
Gossypium raimondii Gorai.001G232600 Chr01 - View
Helianthus annuus HanXRQChr05g0155511 Putative tetratricopeptide-like helical domain HanXRQChr05 + View
Lupinus albus Lalb_Chr12g0196961 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr12 + View
Lotus japonicus Lj2g0015722 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) chr2 - View
Lonicera japonica Lj5P109T17 GWHAAZE00000005 + View
Lonicera japonica Lj7E580T0 GWHAAZE00000007 + View
Manihot esculenta Manes.14G078400 Chromosome14 + View
Olea europaea Oeu047003.1 scaffold489 - View
Punica granatum PGR083G2601 NC_045133.1 - View
Punica granatum PGR083G2611 NC_045133.1 - View
Phaseolus vulgaris Phvul.003G188600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr03 - View
Phaseolus vulgaris Phvul.008G037800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr08 - View
Phaseolus vulgaris Phvul.009G185632 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 + View
Quercus lobata QL10p016039 10 + View
Rhododendron simsii Rhsim12G0154400 chr12 - View
Salvia bowleyana SalBow7G3202 GWHASIU00000005 - View
Simmondsia chinensis Sc10g0009820 GWHAASQ00000010 + View
Simmondsia chinensis Sc04g0002600 GWHAASQ00000004 - View
Sechium edule Sed0014076 LG08 - View
Sechium edule Sed0016252 LG12 + View
Schrenkiella parvula Sp5g29560 PF01535 - PPR repeat (PPR) ch5-7 + View
Trochodendron aralioides TAR629G1856 group0 + View
Theobroma cacao Thecc.03G093500 Tetratricopeptide repeat-like superfamily protein Chromosome_3 + View
Vaccinium macrocarpon vmacro18184 Protein of unknown function chr3_Vaccinium_macrocarpon_Stevens_v1 - View