Gene: AT3G47530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G47530
  • Transcript Identifier AT3G47530.1
  • Gene Type Coding gene
  • Location Chr3 : 17517382-17519157 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G47530.1
  • uniprot Q9SN85

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein
  • Computational description Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1); Has 30892 Blast hits to 13336 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 60; Plants - 30406; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900865
IBA
Gene Ontologychloroplast RNA modification1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
Gene Ontologychloroplast1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032867 DYW domain
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated