Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold186G40142 scaffold186 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia02276 Lachesis_group20 - View
Avicennia marina MSTRG.16067 ScioBoG_19538_HRSCAF_19626 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WK75UE K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7YIN9J PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 arahy.Tifrunner.gnm1.Arahy.04 - View
Amborella trichopoda ATR0751G251 AmTr_v1.0_scaffold00061 - View
Cannabis sativa CANSAT56G2025 NC_044371.1 - View
Coffea canephora Cc09_g00160 Putative RNA polymerase II, Rpb4, core protein chr9 - View
Carpinus fangiana Cfa000015 Cfa01 - View
Carya illinoinensis CiPaw.10G083700 PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Chr10 + View
Citrullus lanatus ClCG01G021110 DNA-directed RNA polymerase II subunit rpb4 CG_Chr01 - View
Carica papaya Cpa.g.sc27.205 supercontig_27 - View
Cucumis sativus L. CsaV3_6G048110 DNA-directed RNA polymerase II subunit 4 chr6 - View
Davidia involucrata Dinv07137 GWHABJS00000016 - View
Erigeron canadensis ECA248G0907 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.D00945 Chr04 + View
Erythranthe guttata Migut.M01463 scaffold_13 + View
Eutrema salsugineum Thhalv10001026m.g PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 scaffold_20 + View
Gossypium hirsutum Gohir.A06G157300 PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 A06 + View
Gossypium hirsutum Gohir.D06G163600 PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 D06 + View
Glycine max Glyma.09G016100 PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Gm09 + View
Glycine max Glyma.15G121800 PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Gm15 + View
Gossypium raimondii Gorai.010G190700 Chr10 + View
Lupinus albus Lalb_Chr18g0057441 K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) Lalb_Chr18 + View
Lupinus albus Lalb_Chr20g0119621 K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) Lalb_Chr20 + View
Lotus japonicus Lj6g0012975 K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) chr6 + View
Malus domestica MD05G1363300 RNA polymerase II Chr05 + View
Malus domestica MD10G1340900 RNA polymerase II Chr10 + View
Manihot esculenta Manes.09G085000 Chromosome09 - View
Medicago truncatula Medtr2g027530 RNA polymerase II, Rpb4, core protein chr2 + View
Nelumbo nucifera Nn1g07725 chr1 - View
Nicotiana tabacum Nitab4.5_0000147g0240 HRDC-like Nitab4.5_0000147 - View
Olea europaea Oeu025979.1 chr13 + View
Oryza sativa ssp. japonica Os02g0723300 Hypothetical conserved gene. chr02 - View
Prunus persica Prupe.4G002300 Pp04 - View
Pisum sativum Psat1g171880 RNA polymerase Rpb4 chr1LG6 - View
Populus trichocarpa Potri.016G003200 PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Chr16 - View
Phaseolus vulgaris Phvul.006G135800 PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Chr06 - View
Quercus lobata QL05p066607 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0000271 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0138400 chr13 - View
Salvia bowleyana SalBow8G5548 GWHASIU00000004 - View
Simmondsia chinensis Sc17g0008060 GWHAASQ00000017 - View
Solanum lycopersicum Solyc04g015180.3 DNA-directed RNA polymerase II subunit 4 (AHRD V3.3 *** A0A1U8HA52_CAPAN) SL4.0ch04 + View
Schrenkiella parvula Sp2g12487 PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 ch2-4 + View
Solanum pennellii Sopen04g007220 Non-catalytic subunit common to Nuclear DNA-dependent RNA polymerases IV and V | homologous to budding yeast RPB4. Role in gene silencing. Required for RNA-directed DNA methylation. | NRPD4 | FUNCTIONS IN: DNA-directed RNA polymerase activity, nucleotide binding, catalytic activity | INVOLVED IN: RNA interference, interphase, production of siRNA involved in RNA interference, DNA methylation on cytosine within a CHH sequence | LOCATED IN: DNA-directed RNA polymerase V complex, nucleus, DNA-directed RNA polymerase IV complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: HRDC-like , RNA polymerase II, Rpb4 , RNA polymerase II, Rpb4, core | BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein Spenn-ch04 + View
Tripterygium wilfordii TWI38G0736 NC_052252.1 - View
Vaccinium macrocarpon vmacro03592 Similar to NRPD4: DNA-directed RNA polymerases IV and V subunit 4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G1254 CM024075.1 + View