Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Avicennia marina MSTRG.4048 ScioBoG_102837_HRSCAF_103074 - View
Arabidopsis thaliana AT3G22690 LOW protein: PPR containing-like protein CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881)%2C Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1)%3B Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2%3B Bacteria - 10%3B Metazoa - 107%3B Fungi - 167%3B Plants - 48594%3B Viruses - 0%3B Other Eukaryotes - 904 (source: NCBI BLink). INVOLVED IN: photosystem II assembly%2C regulation of chlorophyll biosynthetic process%2C photosystem I assembly%2C thylakoid membrane organization%2C RNA modification%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). Chr3 - View
Amborella trichopoda ATR0665G144 AmTr_v1.0_scaffold00002 + View
Brassica carinata BcaC05g28027 ChrC05 + View
Brassica oleracea BolC5t32784H C5 + View
Brassica rapa BraA05t21486Z A05 + View
Camellia sinensis var. sinensis CSS0041055 hypothetical protein PRUPE_ppa001360mg [Prunus persica] Chr5 + View
Ceratophyllum demersum CDE07G0539 5 + View
Carpinus fangiana Cfa008462 Cfa03 + View
Cardamine hirsuta CARHR098570 Pentatricopeptide repeat-containing protein Chr3 - View
Carya illinoinensis CiPaw.01G197600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr01 + View
Citrullus lanatus ClCG05G004980 Pentatricopeptide repeat-containing family protein CG_Chr05 + View
Cucumis melo MELO3C006512.2 Pentatricopeptide repeat-containing family protein chr06 + View
Capsella rubella Carub.0003s2285 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_3 - View
Erythranthe guttata Migut.G00366 scaffold_7 - View
Eutrema salsugineum Thhalv10020066m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_13 + View
Gossypium hirsutum Gohir.A10G118300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A10 + View
Lupinus albus Lalb_Chr17g0348041 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr17 + View
Lotus japonicus LjContig00564g0017030 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Contig00564 - View
Magnolia biondii MBI13_g43842_MAGBIO AED:0.11 Chr13 - View
Olea europaea Oeu011635.1 chr4 - View
Olea europaea Oeu063613.2 chr7 - View
Punica granatum PGR119G0130 NC_045132.1 - View
Populus trichocarpa Potri.010G083700 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Salvia bowleyana SalBow2G0389 GWHASIU00000007 + View
Sechium edule Sed0012658 LG02 - View
Solanum lycopersicum Solyc01g008710.5.1 mannan endo-1,4-beta-mannosidase SL4.0ch01 + View
Schrenkiella parvula Sp3g20450 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch3-1 - View
Solanum pennellii Sopen01g004230 Glycosyl hydrolase superfamily protein | FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Glycoside hydrolase, family 5 , Glycoside hydrolase, subgroup, catalytic core | BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400039819 Mannan endo-1,4-beta-mannosidase 4 ST4.03ch01 + View
Zea mays Zm00001eb116480 Zm00001e011417 Pentatricopeptide repeat protein PPR986-12 2 - View