Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Acer truncatum | Atru.chr8.2077 | chr8 | + | View | |
| Actinidia chinensis | Actinidia13160 | Lachesis_group0 | - | View | |
| Arabidopsis lyrata | AL4G34800 | scaffold_4 | + | View | |
| Avicennia marina | MSTRG.19058 | ScioBoG_25048_HRSCAF_25167 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.NPHB92 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | arahy.Tifrunner.gnm1.Arahy.04 | - | View |
| Arabidopsis thaliana | AT2G37860 | reticulata-like protein, putative (DUF3411) Encodes a protein of unknown function. Mutants have pale leaves%2C lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae LOWER CELL DENSITY 1 (LCD1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: leaf development%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825)%3B BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1)%3B Has 533 Blast hits to 494 proteins in 88 species: Archae - 2%3B Bacteria - 54%3B Metazoa - 55%3B Fungi - 24%3B Plants - 316%3B Viruses - 7%3B Other Eukaryotes - 75 (source: NCBI BLink). LOWER CELL DENSITY 1 (LCD1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: leaf development%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825)%3B BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). | Chr2 | + | View |
| Brassica carinata | BcaC02g11916 | ChrC02 | + | View | |
| Brassica carinata | BcaC01g05588 | ChrC01 | - | View | |
| Brassica carinata | BcaB02g09241 | ChrB02 | - | View | |
| Brassica napus | A05p08100 | A05 | - | View | |
| Brassica napus | C03p24550 | C03 | + | View | |
| Brassica napus | A03p20900 | A03 | + | View | |
| Brassica napus | C04p10030 | C04 | - | View | |
| Brassica oleracea | BolC3t14853H | C3 | + | View | |
| Brassica oleracea | BolC4t22606H | C4 | - | View | |
| Brassica rapa | BraA03t11330Z | A03 | + | View | |
| Brassica rapa | BraA05t19778Z | A05 | - | View | |
| Cannabis sativa | CANSAT35G0028 | NC_044378.1 | - | View | |
| Corylus avellana | Haze_20871 | Similar to RE: Protein RETICULATA, chloroplastic (Arabidopsis thaliana OX%3D3702) | 10 | + | View |
| Coffea canephora | Cc06_g02160 | reticulata-related 1 | chr6 | - | View |
| Citrus clementina | Ciclev10011995m.g | scaffold_6 | + | View | |
| Ceratophyllum demersum | CDE03G0465 | 12 | + | View | |
| Ceratophyllum demersum | CDE04G1641 | 2 | + | View | |
| Ceratophyllum demersum | CDE04G1500 | 2 | - | View | |
| Carpinus fangiana | Cfa017310 | Cfa07 | - | View | |
| Cardamine hirsuta | CARHR132410 | Protein of unknown function (DUF3411) | Chr4 | + | View |
| Carya illinoinensis | CiPaw.10G148700 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr10 | + | View |
| Carya illinoinensis | CiPaw.09G199900 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr09 | + | View |
| Citrullus lanatus | ClCG10G021510 | Chloroplast lumen common protein family-like protein | CG_Chr10 | + | View |
| Cucumis melo | MELO3C009222.2 | Protein RETICULATA, chloroplastic | chr04 | + | View |
| Carica papaya | Cpa.g.sc56.47 | supercontig_56 | + | View | |
| Capsella rubella | Carub.0004s1977 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | scaffold_4 | + | View |
| Cucumis sativus L. | CsaV3_3G034510 | protein RETICULATA, chloroplastic-like | chr3 | - | View |
| Daucus carota | DCAR_024053 | hypothetical protein | DCARv2_Chr7 | - | View |
| Davidia involucrata | Dinv37128 | GWHABJS00000021 | + | View | |
| Davidia involucrata | Dinv35549 | GWHABJS00000015 | - | View | |
| Durio zibethinus | Duzib093G2226 | NW_019167937.1 | + | View | |
| Durio zibethinus | Duzib128G0291 | NW_019168481.1 | + | View | |
| Eucalyptus grandis | Eucgr.B02721 | Chr01 | - | View | |
| Erythranthe guttata | Migut.J00274 | scaffold_10 | - | View | |
| Eutrema salsugineum | Thhalv10016685m.g | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | scaffold_10 | + | View |
| Fragaria x ananassa | FAN02G3410 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Fvb6-4 | + | View |
| Fragaria vesca | FvH4_6g12860 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Fvb6 | - | View |
| Gossypium hirsutum | Gohir.A01G221400 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | A01 | - | View |
| Gossypium hirsutum | Gohir.D01G210400 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | D01 | - | View |
| Glycine max | Glyma.18G188800 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Gm18 | + | View |
| Glycine max | Glyma.07G138400 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Gm07 | + | View |
| Gossypium raimondii | Gorai.002G256100 | Chr02 | - | View | |
| Lupinus albus | Lalb_Chr19g0125131 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Lalb_Chr19 | - | View |
| Lupinus albus | Lalb_Chr03g0042571 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Lalb_Chr03 | + | View |
| Lonicera japonica | Lj3A962T51 | GWHAAZE00000003 | - | View | |
| Magnolia biondii | MBI05_g02652_MAGBIO | AED:0.11 | Chr05 | + | View |
| Magnolia biondii | MBI14_g08996_MAGBIO | AED:0.11 | Chr14 | + | View |
| Malus domestica | MD04G1137400 | Protein of unknown function (DUF3411) | Chr04 | + | View |
| Manihot esculenta | Manes.09G097000 | Chromosome09 | + | View | |
| Nelumbo nucifera | Nn2g11270 | chr2 | + | View | |
| Prunus persica | Prupe.6G263400 | Pp06 | + | View | |
| Populus trichocarpa | Potri.016G103100 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr16 | + | View |
| Phaseolus vulgaris | Phvul.008G114600 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr08 | - | View |
| Quercus lobata | QL07p028553 | 7 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr3g0464891 | RcHm_v2.0_Chr3 | - | View | |
| Rhododendron simsii | Rhsim04G0162800 | chr04 | + | View | |
| Sechium edule | Sed0012466 | LG04 | - | View | |
| Solanum lycopersicum | Solyc09g011340.3 | protein RETICULATA, chloroplastic-like (AHRD V3.3 *** A0A2I4ELL8_9ROSI) | SL4.0ch09 | + | View |
| Schrenkiella parvula | Sp4g20170 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | ch4-6 | + | View |
| Solanum pennellii | Sopen09g006060 | Encodes a protein of unknown function. Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae | LOWER CELL DENSITY 1 (LCD1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: leaf development | LOCATED IN: chloroplast, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 | BEST Arabidopsis thaliana protein match is: reticulata-related 1 | Spenn-ch09 | + | View |
| Solanum tuberosum | PGSC0003DMG400024261 | Conserved gene of unknown function | ST4.03ch09 | - | View |
| Trochodendron aralioides | TAR623G0826 | group7 | - | View | |
| Trochodendron aralioides | TAR633G1378 | group2 | - | View | |
| Theobroma cacao | Thecc.05G030600 | Reticulata-related 1 | Chromosome_5 | - | View |
| Tarenaya hassleriana | THA.LOC104824523 | protein RETICULATA%2C chloroplastic | NW_010966881.1 | - | View |
| Tripterygium wilfordii | TWI74G1600 | NC_052234.1 | - | View | |
| Vaccinium macrocarpon | vmacro08630 | Similar to RE: Protein RETICULATA, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr6_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vanilla planifolia | HPP92_012616 | Protein RETICULATA-RELATED 1, chloroplastic *** | CM028154.1 | + | View |
| Vitis vinifera | GSVIVG01034077001 | chr8 | + | View |