Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold94G28632 scaffold94 - View
SGA_v2.0_scaffold126G33849 scaffold126 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7550 LG-5 - View
Aethionema arabicum Aa31LG5G22800 LG-5 + View
Aethionema arabicum Aa31LG1G22200 LG-1 + View
Acer truncatum Atru.chr8.2488 chr8 - View
Acer truncatum Atru.chr3.3805 chr3 + View
Actinidia chinensis Actinidia19751 Lachesis_group17 + View
Actinidia chinensis Actinidia07075 Lachesis_group13 - View
Arabidopsis lyrata AL4G33770 scaffold_4 + View
Arabidopsis lyrata AL4G23190 scaffold_4 + View
Arabidopsis lyrata AL6G11880 scaffold_6 - View
Avicennia marina MSTRG.10277 ScioBoG_13798_HRSCAF_13862 - View
Avicennia marina MSTRG.5696 ScioBoG_102839_HRSCAF_103093 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I2F35R PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UCUQ1W PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VWR9F9 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8IHJ7B PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT2G28660 Chloroplast-targeted copper chaperone protein Chloroplast-targeted copper chaperone protein%3B FUNCTIONS IN: copper ion binding%2C metal ion binding%3B INVOLVED IN: copper ion transport%2C metal ion transport%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%2C Copper chaperone%2C chloroplast-targeted%2C predicted (InterPro:IPR016578)%3B BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1)%3B Has 1827 Blast hits to 1203 proteins in 102 species: Archae - 0%3B Bacteria - 68%3B Metazoa - 145%3B Fungi - 15%3B Plants - 1082%3B Viruses - 0%3B Other Eukaryotes - 517 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G02600 Heavy metal transport/detoxification superfamily protein Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Heavy metal transport/detoxification superfamily protein %3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%3B BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G37390 Chloroplast-targeted copper chaperone protein Chloroplast-targeted copper chaperone protein%3B FUNCTIONS IN: metal ion binding%3B INVOLVED IN: metal ion transport%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121)%2C Copper chaperone%2C chloroplast-targeted%2C predicted (InterPro:IPR016578)%3B BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1)%3B Has 1086 Blast hits to 1014 proteins in 44 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 2%3B Fungi - 4%3B Plants - 1070%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB06g28239 ChrB06 + View
Brassica carinata BcaC06g32002 ChrC06 - View
Brassica carinata BcaB05g21880 ChrB05 + View
Brassica carinata BcaB01g00266 ChrB01 - View
Brassica napus C02p00570 C02 - View
Brassica napus C09p74010 C09 + View
Brassica napus A04p28540 A04 + View
Brassica napus C04p57860 C04 + View
Brassica napus C04p65870 C04 + View
Brassica napus A07p21710 A07 + View
Brassica napus A10p33040 A10 + View
Brassica napus C04p10640 C04 - View
Brassica napus A05p08560 A05 - View
Brassica oleracea BolC6t37332H C6 + View
Brassica oleracea BolC4t27306H C4 + View
Brassica oleracea BolC2t06056H C2 - View
Brassica oleracea BolC4t22655H C4 - View
Brassica oleracea BolC9t60136H C9 + View
Brassica oleracea BolC4t28091H C4 + View
Brassica rapa BraA04t18332Z A04 + View
Brassica rapa BraA07t29853Z A07 + View
Brassica rapa BraA02t04725Z A02 - View
Brassica rapa BraA05t19824Z A05 - View
Brassica rapa BraA09t40119Z A09 + View
Brassica rapa BraA10t45341Z A10 + View
Brassica rapa BraA04t17741Z A04 + View
Camellia sinensis var. sinensis CSS0048995 Chloroplast-targeted copper chaperone, putative [Theobroma cacao] Chr4 + View
Cicer arietinum L. Ca_08797_v3 Ca_LG3_v3 - View
Corylus avellana Haze_20716 Similar to NAKR2: Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc01_g12180 Chloroplast-targeted copper chaperone, putative chr1 + View
Coffea canephora Cc06_g03140 Putative uncharacterized protein chr6 - View
Citrus clementina Ciclev10012329m.g scaffold_6 + View
Citrus clementina Ciclev10029192m.g scaffold_8 + View
Carpinus fangiana Cfa017449 Cfa07 - View
Cardamine hirsuta CARHR210750 Heavy metal transport/detoxification superfamily protein Chr6 + View
Cardamine hirsuta CARHR132210 Heavy metal transport/detoxification superfamily protein Chr4 - View
Cardamine hirsuta CARHR163440 Heavy metal transport/detoxification superfamily protein Chr5 + View
Cardamine hirsuta CARHR121770 Heavy metal transport/detoxification superfamily protein Chr4 + View
Carya illinoinensis CiPaw.13G100600 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Chr13 - View
Carya illinoinensis CiPaw.10G141500 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Chr10 + View
Carya illinoinensis CiPaw.09G187200 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Chr09 + View
Citrullus lanatus ClCG04G008530 Copper chaperone CG_Chr04 - View
Citrullus lanatus ClCG10G020850 Chloroplast-targeted copper chaperone, putative CG_Chr10 + View
Cucumis melo MELO3C009286.2 heavy metal-associated isoprenylated plant protein 3-like chr04 + View
Cucumis melo MELO3C013671.2 Heavy-metal-associated domain protein chr11 + View
Cucumis melo MELO3C003095.2 heavy metal-associated isoprenylated plant protein 3-like chr08 + View
Carica papaya Cpa.g.sc114.4 supercontig_114 - View
Capsella rubella Carub.0004s1929 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN scaffold_4 + View
Capsella rubella Carub.0004s0965 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED scaffold_4 + View
Capsella rubella Carub.0006s0141 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN scaffold_6 - View
Cucumis sativus L. CsaV3_3G035170 Heavy metal-associated domain containing protein chr3 - View
Cucumis sativus L. CsaV3_4G024620 Heavy metal-associated domain containing protein chr4 + View
Davidia involucrata Dinv37220 GWHABJS00000021 + View
Davidia involucrata Dinv35660 GWHABJS00000015 - View
Durio zibethinus Duzib093G1882 NW_019167937.1 + View
Durio zibethinus Duzib128G0279 NW_019168481.1 + View
Durio zibethinus Duzib170G0162 NW_019167871.1 - View
Durio zibethinus Duzib168G2065 NW_019168159.1 - View
Erigeron canadensis ECA248G3278 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.K03174 Chr11 - View
Eucalyptus grandis Eucgr.B02409 Chr02 - View
Eucalyptus grandis Eucgr.A01222 Chr01 - View
Erythranthe guttata Migut.L01628 scaffold_12 - View
Erythranthe guttata Migut.J00382 scaffold_10 - View
Eutrema salsugineum Thhalv10017086m.g PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN scaffold_10 + View
Eutrema salsugineum Thhalv10015743m.g PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN scaffold_2 - View
Eutrema salsugineum Thhalv10017074m.g PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN scaffold_10 + View
Fragaria x ananassa FAN02G0868 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Fvb6-4 - View
Fragaria x ananassa FAN09G2510 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Fvb6-2 + View
Fragaria x ananassa FAN11G1581 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Fvb3-4 + View
Fragaria vesca FvH4_6g14630 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Fvb6 - View
Gossypium hirsutum Gohir.A04G078800 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN A04 + View
Gossypium hirsutum Gohir.A01G219200 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN A01 + View
Gossypium hirsutum Gohir.A05G098400 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED A05 - View
Gossypium hirsutum Gohir.D01G208300 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN D01 + View
Gossypium hirsutum Gohir.D04G118000 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN D04 + View
Gossypium hirsutum Gohir.D05G098500 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED D05 - View
Glycine max Glyma.15G042200 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Gm15 - View
Glycine max Glyma.03G174100 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Gm03 - View
Glycine max Glyma.19G175100 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Gm19 - View
Glycine max Glyma.11G144500 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Gm11 - View
Glycine max Glyma.10G045700 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Gm10 - View
Glycine max Glyma.13G133600 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Gm13 - View
Glycine max Glyma.13G332001 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Gm13 + View
Gossypium raimondii Gorai.009G423000 Chr09 + View
Gossypium raimondii Gorai.009G102100 Chr09 - View
Gossypium raimondii Gorai.002G253400 Chr02 + View
Helianthus annuus HanXRQChr14g0453821 Probable chloroplast-targeted copper chaperone protein HanXRQChr14 - View
Hydrangea macrophylla Hma1.2p1_0111F.1_g053230 Hma1.2p1_0111F.1 - View
Lupinus albus Lalb_Chr02g0153281 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Lalb_Chr02 - View
Lupinus albus Lalb_Chr01g0003891 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Lalb_Chr01 - View
Lotus japonicus Lj3g0003222 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED chr3 - View
Lotus japonicus Lj1g0004558 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN chr1 + View
Lotus japonicus Lj3g0013527 PTHR22814//PTHR22814:SF82 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED chr3 - View
Lonicera japonica Lj2A1050T28 GWHAAZE00000002 + View
Lonicera japonica Lj2A102T68 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_1_55101 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Lsat_1_v8_lg_1 + View
Malus domestica MD12G1133800 Chloroplast-targeted copper chaperone protein Chr12 + View
Malus domestica MD11G1115900 Chloroplast-targeted copper chaperone protein Chr11 - View
Malus domestica MD04G1118300 Chloroplast-targeted copper chaperone protein Chr04 + View
Manihot esculenta Manes.04G029700 Chromosome04 + View
Manihot esculenta Manes.08G074600 Chromosome08 - View
Manihot esculenta Manes.09G085600 Chromosome09 + View
Medicago truncatula Medtr1g067560 copper chaperone chr1 + View
Medicago truncatula Medtr4g062450 heavy-metal-associated domain protein chr4 + View
Medicago truncatula Medtr7g100450 copper chaperone chr7 + View
Nelumbo nucifera Nn2g12857 chr2 + View
Olea europaea Oeu060060.1 scaffold83 - View
Oryza sativa ssp. japonica Os03g0819400 Heavy metal transport/detoxification protein domain containing protein. chr03 - View
Petunia axillaris Peaxi162Scf00039g00614 Chloroplast-targeted copper chaperone protein Peaxi162Scf00039 + View
Punica granatum PGR004G0431 NC_045131.1 + View
Punica granatum PGR102G0240 NC_045129.1 + View
Prunus persica Prupe.6G247400 Pp06 + View
Phaseolus vulgaris Phvul.001G171400 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN Chr01 - View
Quercus lobata QL07p046572 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0467751 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim05G0186100 chr05 - View
Rhododendron simsii Rhsim13G0087800 chr13 - View
Salvia bowleyana SalBow3G2776 GWHASIU00000006 - View
Salvia bowleyana SalBow4G2001 GWHASIU00000008 + View
Salvia bowleyana SalBow3G0232 GWHASIU00000006 + View
Salix brachista Sabra16G0088600 GWHAAZH00000016 - View
Simmondsia chinensis Sc20g0004370 GWHAASQ00000020 + View
Simmondsia chinensis Sc12g0001770 GWHAASQ00000012 - View
Sechium edule Sed0005368 LG04 - View
Sechium edule Sed0028169 LG14 + View
Sechium edule Sed0013886 LG05 + View
Sechium edule Sed0021716 LG02 - View
Schrenkiella parvula Sp4g11520 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN ch4-6 + View
Schrenkiella parvula Sp6g39910 PTHR22814:SF16 - CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN ch6-6 + View
Schrenkiella parvula Sp5g08800 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN ch5-1 - View
Schrenkiella parvula Sp4g19700 PTHR22814//PTHR22814:SF16 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // CHLOROPLAST-TARGETED COPPER CHAPERONE PROTEIN ch4-6 + View
Selenicereus undatus Hund18944 Scaffold_33675 - View
Trochodendron aralioides TAR369G0211 group18 - View
Theobroma cacao Thecc.05G047000 Chloroplast-targeted copper chaperone Chromosome_5 - View
Tarenaya hassleriana THA.LOC104816294 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like NW_010965775.1 - View
Tarenaya hassleriana THA.LOC104823433 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like NW_010966881.1 - View
Tripterygium wilfordii TWI53G1282 NC_052244.1 + View
Tripterygium wilfordii TWI79G0459 NC_052238.1 - View
Vaccinium macrocarpon vmacro20107 Similar to NAKR3: Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1192 CM024071.1 + View
Vigna mungo VMungo1127G0776 CM024076.1 + View
Vigna mungo VMungo1383G0767 CM024070.1 - View
Vanilla planifolia HPP92_019811 Heavy metal transport/detoxification superfamily protein *-* CM028159.1 - View
Vitis vinifera GSVIVG01025049001 chr6 + View
Vitis vinifera GSVIVG01025598001 chr8 - View
Zea mays Zm00001eb290040 Zm00001e149662 Heavy metal transport/detoxification superfamily protein 6 - View