Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold126G33931 scaffold126 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12620 LG-1 - View
Acer truncatum Atru.chr8.1869 chr8 + View
Actinidia chinensis Actinidia13085 Lachesis_group0 - View
Arabidopsis lyrata AL5G34350 scaffold_5 - View
Arabidopsis lyrata AL8G37260 scaffold_8 - View
Arabidopsis lyrata AL4G33550 scaffold_4 - View
Avicennia marina MSTRG.18659 ScioBoG_22153_HRSCAF_22259 - View
Avicennia marina MSTRG.5744 ScioBoG_102839_HRSCAF_103093 - View
Avicennia marina MSTRG.19157 ScioBoG_25048_HRSCAF_25167 - View
Amaranthus hybridus Ah.08g211820 AmaHy_arrow1_Scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C3IVFD K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4R7GUL K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JI8LYR K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G60670 Ribosomal protein L11 family protein Ribosomal protein L11 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L11%2C C-terminal domain (InterPro:IPR020783)%2C Ribosomal protein L11%2C N-terminal domain (InterPro:IPR020784)%2C Ribosomal protein L11%2C conserved site (InterPro:IPR020785)%2C Ribosomal protein L11 (InterPro:IPR000911)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G37190 Ribosomal protein L11 family protein Ribosomal protein L11 family protein%3B FUNCTIONS IN: structural constituent of ribosome%2C zinc ion binding%3B INVOLVED IN: response to cold%2C ribosome biogenesis%3B LOCATED IN: in 7 components%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L11%2C C-terminal domain (InterPro:IPR020783)%2C Ribosomal protein L11%2C N-terminal domain (InterPro:IPR020784)%2C Ribosomal protein L11%2C conserved site (InterPro:IPR020785)%2C Ribosomal protein L11 (InterPro:IPR000911)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1)%3B Has 1580 Blast hits to 1580 proteins in 592 species: Archae - 303%3B Bacteria - 410%3B Metazoa - 359%3B Fungi - 167%3B Plants - 131%3B Viruses - 0%3B Other Eukaryotes - 210 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G53430 Ribosomal protein L11 family protein Ribosomal protein L11 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L11%2C C-terminal domain (InterPro:IPR020783)%2C Ribosomal protein L11%2C N-terminal domain (InterPro:IPR020784)%2C Ribosomal protein L11%2C conserved site (InterPro:IPR020785)%2C Ribosomal protein L11 (InterPro:IPR000911)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT2G37190.1)%3B Has 1591 Blast hits to 1591 proteins in 594 species: Archae - 303%3B Bacteria - 412%3B Metazoa - 359%3B Fungi - 167%3B Plants - 131%3B Viruses - 0%3B Other Eukaryotes - 219 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB01g00279 ChrB01 + View
Brassica carinata BcaC02g07543 ChrC02 + View
Brassica carinata BcaC02g11840 ChrC02 - View
Brassica napus A09p46430 A09 - View
Brassica napus A05p08700 A05 + View
Brassica napus A03p20500 A03 - View
Brassica napus C08p28770 C08 - View
Brassica napus C09p53400 C09 - View
Brassica napus C03p24100 C03 - View
Brassica napus C04p10790 C04 + View
Brassica oleracea BolC4t22674H C4 + View
Brassica oleracea BolC8t50480H C8 - View
Brassica oleracea BolC4t28073H C4 - View
Brassica oleracea BolC6t37309H C6 - View
Brassica rapa BraA09t40108Z A09 - View
Brassica rapa BraA05t19839Z A05 + View
Camellia sinensis var. sinensis CSS0002537 PREDICTED: 60S ribosomal protein L12 [Malus domestica] Chr10 + View
Cicer arietinum L. Ca_11472_v3 Ca_LG4_v3 - View
Corylus avellana Haze_20591 Similar to RPL12: 60S ribosomal protein L12 (Prunus armeniaca OX%3D36596) 10 + View
Citrus clementina Ciclev10012805m.g scaffold_6 + View
Carpinus fangiana Cfa017563 Cfa07 - View
Cardamine hirsuta CARHR131700 60S ribosomal protein L12 Chr4 - View
Cardamine hirsuta CARHR274350 60S ribosomal protein L12 Chr8 - View
Carya illinoinensis CiPaw.09G176200 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Chr09 + View
Carya illinoinensis CiPaw.10G133800 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Chr10 + View
Citrullus lanatus ClCG04G009040 Ribosomal protein L12 CG_Chr04 - View
Citrullus lanatus ClCG02G021160 Ribosomal-like protein CG_Chr02 - View
Citrullus lanatus ClCG10G020320 Ribosomal protein L12 CG_Chr10 + View
Cucumis melo MELO3C009338.2 60S ribosomal protein L12 chr04 + View
Cucumis melo MELO3C014237.2 60S ribosomal protein L12 chr08 + View
Capsella rubella Carub.0005s2000 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) scaffold_5 - View
Capsella rubella Carub.0008s2135 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) scaffold_8 - View
Capsella rubella Carub.0004s1908 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) scaffold_4 - View
Cucumis sativus L. CsaV3_3G035780 60s ribosomal protein l12 chr3 - View
Cucumis sativus L. CsaV3_6G039570 60S ribosomal protein L12 chr6 - View
Daucus carota DCAR_014982 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_017706 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv35756 GWHABJS00000015 - View
Davidia involucrata Dinv37283 GWHABJS00000021 + View
Durio zibethinus Duzib170G0303 NW_019167871.1 - View
Durio zibethinus Duzib093G0906 NW_019167937.1 + View
Durio zibethinus Duzib128G1315 NW_019168481.1 + View
Durio zibethinus Duzib106G1954 NW_019168492.1 + View
Eucalyptus grandis Eucgr.A01152 Chr01 - View
Eucalyptus grandis Eucgr.K03247 Chr11 - View
Erythranthe guttata Migut.J00546 scaffold_10 + View
Eutrema salsugineum Thhalv10014862m.g K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) scaffold_2 + View
Eutrema salsugineum Thhalv10010772m.g K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) scaffold_16 + View
Eutrema salsugineum Thhalv10017332m.g K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) scaffold_10 - View
Fragaria x ananassa FAN05G0356 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Fvb6-3 - View
Fragaria x ananassa FAN02G0911 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Fvb6-4 - View
Fragaria x ananassa FAN14G2400 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Fvb6-1 + View
Gossypium hirsutum Gohir.D09G145500 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) D09 + View
Gossypium hirsutum Gohir.A05G103300 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) A05 - View
Gossypium hirsutum Gohir.D05G103000 PTHR11661//PTHR11661:SF6 - 60S RIBOSOMAL PROTEIN L12 // SUBFAMILY NOT NAMED D05 - View
Gossypium hirsutum Gohir.A09G149600 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) A09 + View
Glycine max Glyma.10G053100 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Gm10 - View
Gossypium raimondii Gorai.006G166700 Chr06 + View
Gossypium raimondii Gorai.009G107300 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0205F.1_g087480 Hma1.2p1_0205F.1 + View
Lupinus albus Lalb_Chr14g0374651 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Lalb_Chr14 + View
Lupinus albus Lalb_Chr03g0027371 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Lalb_Chr03 - View
Lupinus albus Lalb_Chr19g0137241 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Lalb_Chr19 + View
Lupinus albus Lalb_Chr01g0004301 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Lalb_Chr01 - View
Lotus japonicus Lj5g0004948 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) chr5 + View
Lotus japonicus Lj3g0023951 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) chr3 - View
Lonicera japonica Lj1P193T24 GWHAAZE00000001 - View
Lonicera japonica Lj3A981T70 GWHAAZE00000003 - View
Lonicera japonica Lj2P111T57 GWHAAZE00000002 - View
Lonicera japonica Lj2A1028T34 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_30521 Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_1_54400 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_6_45980 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Lsat_1_v8_lg_6 + View
Malus domestica MD04G1097900 Ribosomal protein L11 family protein Chr04 + View
Manihot esculenta Manes.11G145400 Chromosome11 - View
Manihot esculenta Manes.09G068860 Chromosome09 + View
Manihot esculenta Manes.04G021000 Chromosome04 + View
Manihot esculenta Manes.08G007000 Chromosome08 - View
Medicago truncatula Medtr2g094300 60S ribosomal L12-like protein chr2 - View
Medicago truncatula Medtr1g064500 60S ribosomal L12-like protein chr1 + View
Nicotiana tabacum Nitab4.5_0000106g0160 Ribosomal protein L11, N-terminal, Ribosomal protein L11, Ribosomal protein L11, C-terminal, Ribosomal protein L11, conserved site Nitab4.5_0000106 - View
Olea europaea Oeu014954.1 chr11 + View
Punica granatum PGR004G0185 NC_045131.1 + View
Punica granatum PGR142G2281 NC_045128.1 - View
Pisum sativum Psat6g066760 Ribosomal protein L11 + N-terminal domain chr6LG2 + View
Phaseolus vulgaris Phvul.011G079400 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Chr11 - View
Quercus lobata QL07p044449 7 + View
Rhododendron simsii Rhsim05G0181000 chr05 + View
Salvia bowleyana SalBow3G3702 GWHASIU00000006 - View
Simmondsia chinensis Sc20g0005230 GWHAASQ00000020 - View
Sechium edule Sed0023255 LG02 + View
Sechium edule Sed0010332 LG04 - View
Sechium edule Sed0011073 LG14 + View
Sechium edule Sed0027331 LG03 - View
Solanum lycopersicum Solyc11g069440.1 60S ribosomal protein L12 (AHRD V3.3 *** Q6RJY1_CAPAN) SL4.0ch11 - View
Schrenkiella parvula Sp5g08910 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) ch5-1 + View
Schrenkiella parvula Sp4g19500 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) ch4-6 - View
Schrenkiella parvula Sp6g22240 K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) ch6-6 - View
Solanum pennellii Sopen11g028160 Ribosomal protein L11 family protein | FUNCTIONS IN: structural constituent of ribosome, zinc ion binding | INVOLVED IN: response to cold, ribosome biogenesis | LOCATED IN: in 7 components | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain , Ribosomal protein L11, N-terminal domain , Ribosomal protein L11, conserved site , Ribosomal protein L11 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein Spenn-ch11 - View
Trochodendron aralioides TAR623G0281 group7 + View
Tripterygium wilfordii TWI74G1300 NC_052234.1 + View
Tripterygium wilfordii TWI77G0002 NC_052236.1 + View
Tripterygium wilfordii TWI75G0373 NC_052253.1 - View
Tripterygium wilfordii TWI79G1386 NC_052238.1 - View
Vaccinium macrocarpon vmacro20041 Similar to RPL12: 60S ribosomal protein L12 (Prunus armeniaca OX%3D36596) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01025683001 chr8 + View