Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13718 scaffold34 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G10130 LG-5 + View
Acer truncatum Atru.chr2.2831 chr2 - View
Actinidia chinensis Actinidia18752 Lachesis_group9 + View
Actinidia chinensis Actinidia35272 Lachesis_group2 + View
Arabidopsis lyrata AL7G25410 scaffold_7 + View
Avicennia marina MSTRG.6849 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.15210 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.04g164980 AmaHy_arrow1_Scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IDBP1F arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.20QRXD arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT4G27390 transmembrane protein unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0693G366 AmTr_v1.0_scaffold00003 + View
Beta vulgaris EL10Ac4g08079 Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G162.95 PGAv.1.6.scaffold162 - View
Corylus avellana Haze_09516 Similar to LDL2: Lysine-specific histone demethylase 1 homolog 2 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g12580 Putative Uncharacterized protein ynbB chr5 + View
Citrus clementina Ciclev10007556m.g scaffold_1 + View
Carpinus fangiana Cfa020516 Cfa08 - View
Cardamine hirsuta CARHR235060 unknown protein Chr7 - View
Carya illinoinensis CiPaw.11G175300 2.5.1.48//4.4.1.11 - Cystathionine gamma-synthase / O-succinylhomoserine synthetase // Methionine gamma-lyase / Methionine lyase Chr11 + View
Citrullus lanatus ClCG11G018400 Lysine-specific histone demethylase-like protein CG_Chr11 + View
Citrullus lanatus ClCG10G006570 AT4g27390/M4I22_200 CG_Chr10 - View
Cucumis melo MELO3C016549.2 U3 small nucleolar RNA-associated protein 14 B isoform 3 chr06 - View
Cucumis melo MELO3C018203.2 Lysine-specific histone demethylase 1-like protein chr04 + View
Corchorus olitorius COL.COLO4_09467 Amine oxidase AWUE01014241.1 + View
Carica papaya Cpa.g.sc80.102 supercontig_80 + View
Chenopodium quinoa AUR62015609 Protein of unknown function C_Quinoa_Scaffold_1529 - View
Chenopodium quinoa AUR62029322 Protein of unknown function C_Quinoa_Scaffold_2939 - View
Capsella rubella Carub.0007s1348 scaffold_7 + View
Cucumis sativus L. CsaV3_3G006020 U3 small nucleolar RNA-associated protein 14 B isoform 3 chr3 - View
Daucus carota DCAR_009981 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_013076 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv08335 GWHABJS00000013 - View
Davidia involucrata Dinv22370 GWHABJS00000001 + View
Durio zibethinus Duzib268G0235 NW_019168270.1 - View
Durio zibethinus Duzib213G0849 NW_019167993.1 - View
Erigeron canadensis ECA236G1193 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.F01085 Chr06 - View
Eucalyptus grandis Eucgr.F03352 Chr06 + View
Erythranthe guttata Migut.M00869 scaffold_13 + View
Eutrema salsugineum Thhalv10026109m.g scaffold_1 + View
Fragaria x ananassa FAN11G0265 Fvb3-4 - View
Fragaria x ananassa FAN25G1192 Fvb3-1 - View
Fragaria x ananassa FAN16G2536 Fvb3-3 + View
Fragaria x ananassa FAN21G3344 PTHR10742//PTHR10742:SF210 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Fvb3-2 + View
Fragaria vesca FvH4_3g20840 PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Fvb3 + View
Gossypium hirsutum Gohir.D01G055500 PTHR11808//PTHR11808:SF41 - TRANS-SULFURATION ENZYME FAMILY MEMBER // SUBFAMILY NOT NAMED D01 + View
Gossypium hirsutum Gohir.D13G148900 PTHR10742//PTHR10742:SF210 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 D13 - View
Gossypium hirsutum Gohir.A13G144100 PTHR10742//PTHR10742:SF210 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 A13 - View
Gossypium hirsutum Gohir.A01G068201 PTHR11808//PTHR11808:SF41 - TRANS-SULFURATION ENZYME FAMILY MEMBER // SUBFAMILY NOT NAMED A01 + View
Glycine max Glyma.06G250100 PTHR10742//PTHR10742:SF210 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Gm06 + View
Glycine max Glyma.13G281300 Gm13 - View
Glycine max Glyma.12G220000 Gm12 + View
Glycine max Glyma.12G147900 PTHR11808//PTHR11808:SF41 - TRANS-SULFURATION ENZYME FAMILY MEMBER // SUBFAMILY NOT NAMED Gm12 - View
Gossypium raimondii Gorai.013G166600 Chr13 - View
Gossypium raimondii Gorai.002G075600 Chr02 + View
Lupinus albus Lalb_Chr03g0030471 PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Lalb_Chr03 - View
Lupinus albus Lalb_Chr19g0134431 Lalb_Chr19 + View
Lupinus albus Lalb_Chr25g0286691 Lalb_Chr25 - View
Lotus japonicus Lj3g0022224 4.4.1.11 - Methionine gamma-lyase / Methionine lyase chr3 - View
Lonicera japonica Lj1A851T61 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_106320 PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Lsat_1_v8_lg_7 + View
Magnolia biondii MBI02_g10553_MAGBIO AED:0.47 Chr02 + View
Malus domestica MD03G1219800 Protein of unknown function Chr03 - View
Malus domestica MD11G1238100 Protein of unknown function Chr11 - View
Manihot esculenta Manes.03G115600 Chromosome03 + View
Medicago truncatula Medtr2g080290 transmembrane protein, putative chr2 - View
Nelumbo nucifera Nn1g03924 chr1 - View
Nicotiana tabacum Nitab4.5_0000297g0030 SWIRM domain, Homeodomain-like, Amine oxidase, Winged helix-turn-helix DNA-binding domain Nitab4.5_0000297 + View
Olea europaea Oeu019358.1 chr5 + View
Punica granatum PGR083G0680 NC_045133.1 - View
Punica granatum PGR031G2091 NC_045127.1 - View
Prunus persica Prupe.4G188600 PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Pp04 + View
Pisum sativum Psat5g246400 Unknown gene chr5LG3 - View
Papaver somniferum PSO832G2223 NC_039367.1 + View
Papaver somniferum PSO210G3087 NC_039359.1 - View
Papaver somniferum PSO675G6832 NC_039358.1 - View
Populus trichocarpa Potri.001G405800 Chr01 + View
Populus trichocarpa Potri.011G127600 PTHR10742//PTHR10742:SF210 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Chr11 + View
Phaseolus vulgaris Phvul.011G154200 PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Chr11 + View
Quercus lobata QL08p018706 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0035141 RcHm_v2.0_Chr5 + View
Salix brachista Sabra16G0267700 GWHAAZH00000016 + View
Salix brachista Sabra11G0110000 GWHAAZH00000011 + View
Simmondsia chinensis Sc03g0009630 GWHAASQ00000003 - View
Sechium edule Sed0008890 LG13 + View
Sechium edule Sed0023337 LG04 - View
Solanum lycopersicum Solyc07g063450.3 Lysine-specific histone demethylase 1-like protein 2 (AHRD V3.3 *** A0A2G3C377_CAPCH) SL4.0ch07 + View
Schrenkiella parvula Sp7g25320 ch7-4 - View
Solanum pennellii Sopen07g031620 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA. | LSD1-like2 (LDL2) | CONTAINS InterPro DOMAIN/s: Amine oxidase , SWIRM | BEST Arabidopsis thaliana protein match is: LSD1-like 1 Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400019290 Flavin-containing amine oxidase domain-containing protein ST4.03ch07 + View
Trochodendron aralioides TAR626G1568 group3 - View
Theobroma cacao Thecc.07G072900 U3 small nucleolar RNA-associated protein 14 B Chromosome_7 - View
Tarenaya hassleriana THA.LOC104799911 uncharacterized protein LOC104799911 NW_010968712.1 - View
Tripterygium wilfordii TWI39G0108 NC_052250.1 + View
Vigna mungo VMungo1127G1042 CM024076.1 - View
Vitis vinifera GSVIVG01014417001 chr19 + View