Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13823 scaffold34 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G2090 LG-10 + View
Acer truncatum Atru.chr2.2652 chr2 - View
Actinidia chinensis Actinidia05634 Lachesis_group20 - View
Actinidia chinensis Actinidia12813 Lachesis_group19 + View
Actinidia chinensis Actinidia01882 Lachesis_group0 - View
Actinidia chinensis Actinidia09679 Lachesis_group5 - View
Arabidopsis lyrata AL1G61340 scaffold_1 - View
Avicennia marina MSTRG.15225 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.06g184010 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (AtCKS) (CMP-KDO synthase) AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NKF69P 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.46T9HD K00979 - 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) (kdsB) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G53000 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation. KDSB%3B FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity%2C nucleotidyltransferase activity%3B INVOLVED IN: lipopolysaccharide biosynthetic process%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528)%2C Acylneuraminate cytidylyltransferase (InterPro:IPR003329)%3B Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38%3B Bacteria - 4007%3B Metazoa - 8%3B Fungi - 0%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 3395 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g33367 ChrB07 + View
Beta vulgaris EL10Ac4g08152 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0031480 Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao] Contig361 + View
Camellia sinensis var. sinensis CSS0007181 Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao] Contig815 + View
Capsicum annuum CAN.G1110.56 PGAv.1.6.scaffold1110 - View
Capsicum annuum CAN.G162.63 PGAv.1.6.scaffold162 + View
Corylus avellana Haze_06461 Similar to KDSB: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_09417 Similar to KDSB: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g12120 Putative 3-deoxy-manno-octulosonate cytidylyltransferase chr5 + View
Citrus clementina Ciclev10009061m.g scaffold_1 - View
Carpinus fangiana Cfa020596 Cfa08 + View
Carpinus fangiana Cfa000456 Cfa01 - View
Cardamine hirsuta CARHR043220 3-deoxy-manno-octulosonate cytidylyltransferase Chr1 - View
Carya illinoinensis CiPaw.11G168500 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Chr11 - View
Citrullus lanatus ClCG10G006920 3-deoxy-manno-octulosonate cytidylyltransferase CG_Chr10 - View
Cucumis melo MELO3C016515.2 3-deoxy-manno-octulosonate cytidylyltransferase chr06 - View
Carica papaya Cpa.g.sc80.53 supercontig_80 - View
Chenopodium quinoa AUR62029379 KDSB: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial C_Quinoa_Scaffold_2939 - View
Capsella rubella Carub.0001s4215 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase scaffold_1 - View
Cucumis sativus L. CsaV3_3G006290 3-deoxy-manno-octulosonate cytidylyltransferase chr3 - View
Davidia involucrata Dinv04311 GWHABJS00000001 + View
Durio zibethinus Duzib170G0119 NW_019167871.1 - View
Durio zibethinus Duzib213G0989 NW_019167993.1 - View
Eucalyptus grandis Eucgr.F01114 Chr06 - View
Erythranthe guttata Migut.M00813 scaffold_13 + View
Eutrema salsugineum Thhalv10011698m.g 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase scaffold_7 + View
Fragaria x ananassa FAN21G2274 K00979 - 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) (kdsB) Fvb3-2 + View
Fragaria x ananassa FAN16G0735 K00979 - 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) (kdsB) Fvb3-3 - View
Fragaria x ananassa FAN11G0414 K00979 - 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) (kdsB) Fvb3-4 + View
Fragaria x ananassa FAN25G2093 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Fvb3-1 + View
Fragaria vesca FvH4_3g20180 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Fvb3 - View
Gossypium hirsutum Gohir.D05G357300 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase D05 + View
Gossypium hirsutum Gohir.A04G029700 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase A04 - View
Glycine max Glyma.12G151500 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Gm12 - View
Glycine max Glyma.06G245100 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Gm06 + View
Gossypium raimondii Gorai.009G389800 Chr09 + View
Helianthus annuus HanXRQChr11g0328431 Probable nucleotide-diphospho-sugar transferases superfamily protein HanXRQChr11 + View
Lupinus albus Lalb_Chr03g0030621 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Lalb_Chr03 - View
Lupinus albus Lalb_Chr01g0006511 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Lalb_Chr01 - View
Lotus japonicus Lj3g0026961 K00979 - 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) (kdsB) chr3 - View
Lonicera japonica Lj8C156T6 GWHAAZE00000008 + View
Lonicera japonica Lj1A1206T62 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_105160 Lsat_1_v8_lg_7 - View
Malus domestica MD11G1244700 Nucleotide-diphospho-sugar transferases superfamily protein Chr11 + View
Malus domestica MD03G1226400 Nucleotide-diphospho-sugar transferases superfamily protein Chr03 - View
Manihot esculenta Manes.03G110800 Chromosome03 + View
Nelumbo nucifera Nn1g04083 chr1 - View
Nelumbo nucifera Nn1g06558 chr1 + View
Nicotiana tabacum Nitab4.5_0000207g0160 3-deoxy-D-manno-octulosonate cytidylyltransferase, Acylneuraminate cytidylyltransferase Nitab4.5_0000207 + View
Nicotiana tabacum Nitab4.5_0002383g0120 3-deoxy-D-manno-octulosonate cytidylyltransferase, Acylneuraminate cytidylyltransferase Nitab4.5_0002383 + View
Nicotiana tabacum Nitab4.5_0003688g0100 3-deoxy-D-manno-octulosonate cytidylyltransferase, Acylneuraminate cytidylyltransferase Nitab4.5_0003688 - View
Olea europaea Oeu060549.1 chr4 - View
Olea europaea Oeu005415.1 chr10 - View
Petunia axillaris Peaxi162Scf00027g02616 3-deoxy-manno-octulosonate cytidylyltransferase Peaxi162Scf00027 + View
Petunia axillaris Peaxi162Scf00069g01341 3-deoxy-manno-octulosonate cytidylyltransferase Peaxi162Scf00069 - View
Prunus persica Prupe.4G047000 Pp04 - View
Prunus persica Prupe.4G183000 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Pp04 + View
Papaver somniferum PSO541G6182 NC_039363.1 + View
Papaver somniferum PSO675G7971 NC_039358.1 - View
Populus trichocarpa Potri.001G400900 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Chr01 + View
Populus trichocarpa Potri.011G120100 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Chr11 + View
Phaseolus vulgaris Phvul.011G157900 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase Chr11 - View
Quercus lobata QL08p021520 8 - View
Quercus lobata QL05p040244 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0033991 RcHm_v2.0_Chr5 - View
Rosa chinensis RcHm_v2.0_Chr5g0008351 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim06G0197600 chr06 - View
Salix brachista Sabra16G0263000 GWHAAZH00000016 + View
Salix brachista Sabra11G0104500 GWHAAZH00000011 + View
Solanum lycopersicum Solyc10g006980.3 3-deoxy-manno-octulosonate cytidylyltransferase (AHRD V3.3 *** KDSB_MAIZE) SL4.0ch10 - View
Schrenkiella parvula Sp1g39560 2.7.7.38 - 3-deoxy-manno-octulosonate cytidylyltransferase / CMP-KDO synthetase ch1-2 - View
Solanum pennellii Sopen10g002890 Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. | KDSB | FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity | INVOLVED IN: lipopolysaccharide biosynthetic process | LOCATED IN: mitochondrion | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase , Acylneuraminate cytidylyltransferase Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG402012419 Cmp-2-keto-3-deoctulosonate (Cmp-kdo) cytidyltransferase ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400025035 Cmp-2-keto-3-deoctulosonate (Cmp-kdo) cytidyltransferase ST4.03ch10 - View
Trochodendron aralioides TAR629G1246 group0 - View
Theobroma cacao Thecc.07G083700 Nucleotide-diphospho-sugar transferases superfamily protein Chromosome_7 - View
Tarenaya hassleriana THA.LOC104818073 3-deoxy-manno-octulosonate cytidylyltransferase%2C mitochondrial NW_010966021.1 - View
Tripterygium wilfordii TWI38G0676 NC_052252.1 - View
Tripterygium wilfordii TWI38G0767 NC_052252.1 + View
Vaccinium macrocarpon vmacro11847 Similar to KDSB: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01014351001 chr19 + View