Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 4.9e-163 577.8 302 100.0
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.6e-145 519.6 302 88.4
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.0e-144 516.9 302 85.1
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 1.8e-144 516.2 300 84.3
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 9.6e-143 510.4 301 85.0
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 5.3e-141 504.6 305 84.9
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.0e-140 502.7 300 82.7
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 2.0e-140 502.7 300 84.0
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.7e-139 499.6 300 85.0
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 3.8e-139 498.4 300 85.0
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 8.4e-139 497.3 280 86.8
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.6e-137 491.5 301 84.7
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 3.0e-136 488.8 281 85.8
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.5e-135 486.5 281 85.1
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 1.9e-135 486.1 296 80.1
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.5e-135 485.7 300 84.0
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 7.4e-135 484.2 300 81.7
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 7.4e-135 484.2 300 83.3
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 9.6e-135 483.8 281 84.7
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.6e-134 483.0 280 85.0
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.6e-134 483.0 302 79.1
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.6e-134 483.0 281 84.3
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.1e-134 482.6 280 84.6
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 2.1e-134 482.6 281 84.0
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.1e-134 482.6 281 84.7
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 2.1e-134 482.6 281 84.0
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 3.7e-134 481.9 281 84.7
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 3.7e-134 481.9 300 78.7
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 8.2e-134 480.7 300 83.3
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 8.2e-134 480.7 300 78.7
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 1.8e-133 479.6 277 84.1
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.4e-133 479.2 280 83.2
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 3.1e-133 478.8 298 79.5
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 3.1e-133 478.8 281 83.6
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 4.1e-133 478.4 300 82.0
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 5.3e-133 478.0 278 85.3
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 5.3e-133 478.0 280 83.9
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 9.0e-133 477.2 280 84.3
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 9.0e-133 477.2 280 83.2
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.5e-132 476.5 300 78.7
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 1.5e-132 476.5 281 83.3
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 4.5e-132 474.9 280 82.9
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 4.5e-132 474.9 282 83.3
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 4.5e-132 474.9 280 83.2
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 4.5e-132 474.9 281 82.6
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 5.8e-132 474.6 280 83.9
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.0e-131 473.8 300 78.0
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.3e-131 473.4 282 83.3
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.7e-131 473.0 280 82.5
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 1.7e-131 473.0 280 83.6
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 2.2e-131 472.6 283 82.3
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.9e-131 472.2 280 83.9
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 3.8e-131 471.9 300 79.3
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 3.8e-131 471.9 296 79.7
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 8.4e-131 470.7 275 83.3
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.1e-130 470.3 280 81.8
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 1.1e-130 470.3 280 81.8
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.1e-130 470.3 280 81.8
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.1e-130 470.3 280 81.8
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.1e-130 470.3 280 81.8
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.1e-130 470.3 280 81.1
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.4e-130 469.9 280 82.1
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 2.5e-130 469.2 300 79.0
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.5e-130 469.2 281 81.9
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 3.2e-130 468.8 300 78.7
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 3.2e-130 468.8 281 82.9
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 4.2e-130 468.4 279 80.6
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 4.2e-130 468.4 268 84.3
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 4.2e-130 468.4 280 81.1
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 7.1e-130 467.6 290 79.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 9.3e-130 467.2 299 78.6
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 1.6e-129 466.5 280 80.7
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 2.1e-129 466.1 280 80.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 2.1e-129 466.1 300 77.7
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 2.7e-129 465.7 277 82.7
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 2.7e-129 465.7 280 80.7
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 2.7e-129 465.7 281 81.5
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 3.5e-129 465.3 281 81.1
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 3.5e-129 465.3 280 81.1
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 4.6e-129 464.9 273 82.1
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 4.6e-129 464.9 300 78.7
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 4.6e-129 464.9 280 81.4
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.0e-128 463.8 300 76.3
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.0e-128 463.8 280 82.5
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.3e-128 463.4 295 81.7
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.3e-128 463.4 280 82.5
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.8e-128 463.0 300 78.7
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 2.3e-128 462.6 280 81.8
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 3.0e-128 462.2 280 80.4
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 3.0e-128 462.2 281 81.5
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 3.0e-128 462.2 300 78.3
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.7e-128 461.1 281 83.3
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 8.7e-128 460.7 280 80.7
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.1e-127 460.3 281 81.1
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 3.3e-127 458.8 280 80.4
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.3e-127 458.4 274 81.8
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 4.3e-127 458.4 280 81.4
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 5.7e-127 458.0 276 80.8
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.3e-126 456.8 276 81.2
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.3e-126 456.8 281 80.1
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.3e-126 456.8 271 84.1
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.6e-126 456.4 281 79.4
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.8e-126 455.7 299 74.9
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 6.3e-126 454.5 254 87.4
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 8.2e-126 454.1 305 76.7
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.1e-125 453.8 279 81.7
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 6.9e-125 451.1 299 77.9
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 9.0e-125 450.7 270 81.1
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.2e-124 450.3 281 79.4
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 2.0e-124 449.5 273 80.2
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 4.5e-124 448.4 301 75.1
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 4.5e-124 448.4 302 74.2
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 5.9e-124 448.0 280 78.2
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.7e-123 446.4 307 73.9
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 5.0e-123 444.9 302 72.2
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 5.5e-122 441.4 266 85.3
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 1.2e-121 440.3 313 74.1
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.4e-120 436.8 298 73.5
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 3.3e-119 432.2 277 78.0
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 2.2e-118 429.5 300 77.0
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 3.2e-114 415.6 362 62.4
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.2e-113 413.7 273 80.6
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 3.6e-113 412.1 219 90.4
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 6.7e-112 407.9 219 89.5
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.7e-110 403.3 277 73.3
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 2.8e-110 402.5 279 68.5
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 8.2e-110 401.0 274 73.4
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 3.1e-109 399.1 248 77.0
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 7.0e-109 397.9 243 81.1
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.5e-108 395.6 216 87.0
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.5e-108 395.6 216 87.0
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.4e-104 383.6 248 70.6
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 1.5e-103 380.2 249 73.9
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.8e-101 373.2 287 67.9
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.8e-96 356.7 198 85.4
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 2.3e-96 356.3 235 79.6
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 3.0e-96 355.9 280 62.9
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 9.8e-95 350.9 215 81.4
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.1e-90 337.4 208 81.7
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 1.8e-88 330.1 180 86.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 2.6e-87 326.2 180 88.3
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 7.5e-79 298.1 172 84.3
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 6.4e-78 295.0 219 72.1
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 3.3e-74 282.7 181 76.8
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 2.6e-71 273.1 152 87.5
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.4e-69 267.3 194 70.1
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.2e-60 237.7 145 79.3
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 4.3e-58 229.2 209 61.7
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.2e-49 201.1 237 48.9
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 5.8e-47 192.2 119 74.8
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.4e-45 187.6 157 63.1
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 7.1e-45 185.3 135 71.1
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.6e-41 174.1 177 56.5
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.2e-39 167.9 105 75.2
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 3.5e-36 156.4 86 82.6
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.9e-34 150.6 96 74.0
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 1.2e-31 141.4 303 34.7
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.9e-30 136.0 82 79.3
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 3.0e-27 126.7 209 40.7
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 8.1e-25 118.6 69 84.1
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.1e-24 118.2 170 41.2
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.4e-24 117.9 66 86.4
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 2.0e-23 114.0 81 71.6
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 3.1e-16 90.1 53 75.5
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-16 90.1 83 56.6
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 5.3e-16 89.4 156 38.5
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.0e-14 85.1 79 57.0
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 3.2e-13 80.1 79 67.1
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.3e-13 78.6 64 65.6
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.3e-13 78.6 64 65.6
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 1.0e-11 75.1 92 45.7
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.9e-11 73.2 57 64.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.5e-10 71.2 110 40.9
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 3.3e-10 70.1 103 41.7
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.7e-09 66.6 63 60.3
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 1.1e-08 65.1 57 52.6
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.4e-08 64.7 34 85.3
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 2.0e-07 60.8 53 62.3
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 7.7e-07 58.9 43 69.8
Actinidia37470 Actinidia chinensis HOM05D003815 ORTHO05D004218 2.2e-06 57.4 35 77.1
MCO17G054 Micromonas commoda HOM05D003815 ORTHO05D270498 5.0e-06 56.2 67 40.3


User provided reference genes

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