Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold4G02077 scaffold4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.4071 chr1 + View
Actinidia chinensis Actinidia21802 Lachesis_group1 - View
Actinidia chinensis Actinidia32203 Lachesis_group27 + View
Arabidopsis lyrata AL2G32140 scaffold_2 - View
Avicennia marina MSTRG.10933 ScioBoG_14204_HRSCAF_14270 - View
Amaranthus hybridus Ah.08g217050 AmaHy_arrow1_Scaffold_8 + View
Arabidopsis thaliana AT1G17380 jasmonate-zim-domain protein 5 jasmonate-zim-domain protein 5 (JAZ5)%3B CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399)%2C CCT domain-like (InterPro:IPR018467)%3B BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 6 (TAIR:AT1G72450.1)%3B Has 301 Blast hits to 296 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 301%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G72450 jasmonate-zim-domain protein 6 JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein%2C presumably by stimulating ubiquitin-proteasome-mediated degradation. jasmonate-zim-domain protein 6 (JAZ6)%3B CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399)%2C CCT domain-like (InterPro:IPR018467)%3B BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 5 (TAIR:AT1G17380.1)%3B Has 303 Blast hits to 298 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 303%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac7g16441 K13464 - jasmonate ZIM domain-containing protein (JAZ) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0010510 JAZ1 [Vitis rupestris] Chr15 - View
Capsicum annuum CAN.G862.42 PGAv.1.6.scaffold862 - View
Cannabis sativa CANSAT56G2651 NC_044371.1 + View
Cicer arietinum L. Ca_23407_v3 Ca_LG7_v3 + View
Corylus avellana Haze_16063 Similar to TIFY11B: Protein TIFY 11B (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g01080 Putative Protein TIFY 10B chr4 - View
Citrus clementina Ciclev10026527m.g scaffold_7 + View
Ceratophyllum demersum CDE05G0578 3 + View
Cardamine hirsuta CARHR065390 jasmonate-zim-domain protein 6 Chr2 - View
Cardamine hirsuta CARHR017980 jasmonate-zim-domain protein 5 Chr1 - View
Carya illinoinensis CiPaw.02G133900 PTHR33077//PTHR33077:SF13 - FAMILY NOT NAMED // PROTEIN TIFY 10A-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G216300 PTHR33077//PTHR33077:SF13 - FAMILY NOT NAMED // PROTEIN TIFY 10A-RELATED Chr01 - View
Citrullus lanatus ClCG09G001120 Jasmonate-zim-domain protein 1 CG_Chr09 + View
Citrullus lanatus ClCG07G014490 Jasmonate ZIM-domain protein 3b CG_Chr07 - View
Cucumis melo MELO3C024336.2 Protein TIFY 10B chr01 - View
Cucumis melo MELO3C022678.2 Protein TIFY 10B chr04 + View
Carica papaya Cpa.g.sc25.146 supercontig_25 + View
Chenopodium quinoa AUR62009919 TIFY10A: Protein TIFY 10A C_Quinoa_Scaffold_2493 + View
Chenopodium quinoa AUR62001446 TIFY10A: Protein TIFY 10A C_Quinoa_Scaffold_2716 - View
Capsella rubella Carub.0002s1930 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED scaffold_2 - View
Capsella rubella Carub.0001s1715 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_3G030830 protein TIFY 10c-like chr3 + View
Cucumis sativus L. CsaV3_7G034270 protein TIFY 10B-like chr7 - View
Daucus carota DCAR_016107 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_007653 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv20411 GWHABJS00000019 + View
Durio zibethinus Duzib192G0491 NW_019168037.1 - View
Durio zibethinus Duzib235G0888 NW_019167982.1 + View
Durio zibethinus Duzib160G0581 NW_019168015.1 + View
Erigeron canadensis ECA232G1983 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA247G0040 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA234G1201 Conyza_canadensis_scaffold:4 - View
Erythranthe guttata Migut.I01104 scaffold_9 + View
Erythranthe guttata Migut.D00926 scaffold_4 - View
Eutrema salsugineum Thhalv10018984m.g K13464 - jasmonate ZIM domain-containing protein (JAZ) scaffold_9 + View
Eutrema salsugineum Thhalv10008415m.g PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED scaffold_5 + View
Fragaria x ananassa FAN09G2579 K13464 - jasmonate ZIM domain-containing protein (JAZ) Fvb6-2 - View
Fragaria vesca FvH4_6g35140 K13464 - jasmonate ZIM domain-containing protein (JAZ) Fvb6 + View
Gossypium hirsutum Gohir.D10G057900 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED D10 + View
Gossypium hirsutum Gohir.A05G139000 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) A05 - View
Gossypium hirsutum Gohir.A10G056000 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED A10 + View
Gossypium hirsutum Gohir.D05G141200 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) D05 - View
Glycine max Glyma.17G047700 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Gm17 - View
Glycine max Glyma.07G041400 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Gm07 + View
Glycine max Glyma.16G010000 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Gm16 + View
Gossypium raimondii Gorai.011G062000 Chr11 + View
Gossypium raimondii Gorai.009G145400 Chr09 - View
Helianthus annuus HanXRQChr04g0094401 Putative tify domain; CO/COL/TOC1, conserved site HanXRQChr04 + View
Helianthus annuus HanXRQChr10g0311841 Putative tify domain; CO/COL/TOC1, conserved site HanXRQChr10 + View
Helianthus annuus HanXRQChr15g0497141 Putative tify domain; CO/COL/TOC1, conserved site HanXRQChr15 + View
Helianthus annuus HanXRQChr09g0277101 Probable TIFY domain/Divergent CCT motif family protein HanXRQChr09 + View
Hydrangea macrophylla Hma1.2p1_0090F.1_g046090 Hma1.2p1_0090F.1 - View
Lupinus albus Lalb_Chr07g0181301 K13464 - jasmonate ZIM domain-containing protein (JAZ) Lalb_Chr07 + View
Lupinus albus Lalb_Chr10g0101351 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Lalb_Chr10 - View
Lupinus albus Lalb_Chr18g0044941 PTHR33077//PTHR33077:SF13 - FAMILY NOT NAMED // PROTEIN TIFY 10A-RELATED Lalb_Chr18 - View
Lotus japonicus Lj3g0014931 K13464 - jasmonate ZIM domain-containing protein (JAZ) chr3 + View
Lotus japonicus Lj6g0004228 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED chr6 - View
Lactuca sativa Lsat_1_v5_gn_5_137041 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Lsat_1_v8_lg_5 + View
Manihot esculenta Manes.16G093500 Chromosome16 - View
Manihot esculenta Manes.04G147900 Chromosome04 + View
Manihot esculenta Manes.11G016700 Chromosome11 - View
Medicago truncatula Medtr8g021380 jasmonate zim-domain protein chr8 + View
Petunia axillaris Peaxi162Scf00038g01961 jasmonate ZIM-domain protein 10 [Nicotiana tabacum] Peaxi162Scf00038 - View
Prunus persica Prupe.3G037800 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Pp03 - View
Populus trichocarpa Potri.003G068900 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Chr03 + View
Populus trichocarpa Potri.001G166200 PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Chr01 - View
Rosa chinensis RcHm_v2.0_Chr2g0146371 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0241000 chr08 + View
Salix brachista Sabra03G0040400 GWHAAZH00000003 + View
Simmondsia chinensis Sc12g0010780 GWHAASQ00000012 + View
Sechium edule Sed0011504 LG06 + View
Sechium edule Sed0000801 LG04 + View
Solanum lycopersicum Solyc12g049400.2 Tify (AHRD V3.3 *** A0A200Q172_9MAGN) SL4.0ch12 + View
Solanum lycopersicum Solyc03g122190.3 Protein TIFY 10A (AHRD V3.3 *** A0A2G2WQ40_CAPBA) SL4.0ch03 - View
Schrenkiella parvula Sp1g15530 K13464 - jasmonate ZIM domain-containing protein (JAZ) ch1-1 - View
Schrenkiella parvula Sp5g27530 K13464 - jasmonate ZIM domain-containing protein (JAZ) ch5-6 - View
Solanum pennellii Sopen03g040960 TIFY10B | CONTAINS InterPro DOMAIN/s: Tify , CCT domain-like | BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 1 Spenn-ch03 - View
Solanum pennellii Sopen12g023880 JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. | TIFY10A | CONTAINS InterPro DOMAIN/s: Tify , CCT domain-like | BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400022888 Salt responsive protein 1 ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400004367 Salt responsive protein 1 ST4.03ch12 + View
Selenicereus undatus Hund18677 Scaffold_33675 - View
Trochodendron aralioides TAR624G0161 group9 - View
Theobroma cacao Thecc.06G123900 Jasmonate-zim-domain protein 6 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104812262 protein TIFY 11B NW_010965372.1 + View
Tripterygium wilfordii TWI59G0473 NC_052248.1 - View
Vaccinium macrocarpon vmacro15051 Similar to TIFY10A: Protein TIFY 10A (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1097 CM024078.1 + View
Vitis vinifera GSVIVG01016721001 chr9 + View
Zea mays Zm00001eb100130 Zm00001e009884 TIFY transcription factor Protein TIFY 10B 2 - View
Zea mays Zm00001eb314010 Zm00001e034256 TIFY25 ZIM-transcription factor 28 7 - View